Gene: PGSC0003DMG400014711

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400014711
  • Transcript Identifier PGSC0003DMT400038147
  • Gene Type Coding gene
  • Location ST4.03ch06 : 1912762-1917908 : positive

Gene Family Information

  • ID HOM05D006183
  • #Genes/#Species 128/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37451133
  • id PGSC0003DMG400014711.v4.03
  • uniprot M1B6E3

Descriptions

  • Description Nucleotide binding protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1903775
IBA
GOA Databaseregulation of DNA double-strand break processing
GO:2001173
IBA
GOA Databaseregulation of histone H2B conserved C-terminal lysine ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035861
IBA
GOA Databasesite of double-strand break
GO:0005634
IBA
GOA Databasenucleus
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT2G20330

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
19.2.2.8.3.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.substrate adaptor (OZS3)