Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 1.9e-253 878.6 432 100.0
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 7.0e-195 684.1 432 77.3
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 6.7e-190 667.5 431 75.9
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.4e-187 659.8 423 76.1
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 4.5e-186 654.8 422 75.4
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 2.9e-185 652.1 434 73.7
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 1.2e-183 646.7 426 74.2
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 3.6e-183 645.2 417 76.3
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 8.0e-183 644.0 452 71.2
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 1.8e-182 642.9 423 74.0
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 5.2e-182 641.3 423 73.8
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 3.3e-181 638.6 436 72.0
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 1.3e-180 636.7 440 71.6
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 4.8e-180 634.8 414 74.2
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.4e-179 633.3 413 74.8
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 7.0e-179 630.9 413 73.4
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 9.1e-179 630.6 413 73.8
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 2.2e-177 625.9 439 71.5
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 1.5e-176 623.2 426 70.7
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 7.2e-176 620.9 406 73.9
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 2.1e-175 619.4 412 73.3
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 8.0e-175 617.5 420 71.9
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 5.2e-174 614.8 426 70.9
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 1.2e-173 613.6 407 72.0
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 2.0e-173 612.8 415 71.3
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.6e-173 612.5 424 70.0
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 4.4e-173 611.7 429 69.5
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 4.4e-173 611.7 436 69.3
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 4.4e-173 611.7 436 69.0
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 5.7e-173 611.3 442 68.3
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 9.8e-173 610.5 430 69.8
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 9.8e-173 610.5 424 69.6
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 9.8e-173 610.5 424 69.8
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 1.3e-172 610.1 425 69.4
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.7e-172 609.8 424 69.6
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 1.7e-172 609.8 422 69.9
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 1.7e-172 609.8 429 68.8
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 2.2e-172 609.4 424 69.8
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 2.2e-172 609.4 383 78.1
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 6.3e-172 607.8 429 69.5
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 8.3e-172 607.4 429 69.5
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 1.1e-171 607.1 425 70.4
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 1.1e-171 607.1 420 69.0
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 1.1e-171 607.1 416 72.8
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 1.4e-171 606.7 424 68.6
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 1.8e-171 606.3 431 67.7
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 9.1e-171 604.0 416 69.5
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 1.2e-170 603.6 429 70.2
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.2e-170 603.6 424 69.6
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 1.6e-170 603.2 422 68.0
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.6e-170 603.2 431 68.2
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 2.7e-170 602.4 416 69.5
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 2.7e-170 602.4 438 68.9
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 3.5e-170 602.1 421 67.5
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 4.5e-170 601.7 420 69.5
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 5.9e-170 601.3 407 71.0
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 5.9e-170 601.3 421 67.2
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 7.7e-170 600.9 430 68.8
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 7.7e-170 600.9 428 67.5
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 1.0e-169 600.5 425 68.9
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 2.3e-169 599.4 416 67.8
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 2.9e-169 599.0 420 68.8
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 5.5e-168 594.7 430 67.4
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 5.5e-168 594.7 430 67.4
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 7.2e-168 594.3 429 67.6
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 7.2e-168 594.3 420 68.3
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 7.2e-168 594.3 420 68.6
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 7.2e-168 594.3 420 68.6
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 7.2e-168 594.3 432 68.3
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 9.5e-168 594.0 430 67.2
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 9.5e-168 594.0 430 67.2
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 1.2e-167 593.6 429 66.7
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 4.7e-167 591.7 430 67.2
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 6.1e-167 591.3 411 70.8
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 3.0e-166 589.0 429 66.7
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 3.0e-166 589.0 429 66.0
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 6.8e-166 587.8 420 67.6
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 2.0e-165 586.3 411 69.8
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 3.4e-165 585.5 429 66.2
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 3.4e-165 585.5 389 75.8
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 7.5e-165 584.3 430 65.6
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 2.8e-164 582.4 415 68.4
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 3.7e-164 582.0 414 68.1
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 1.8e-163 579.7 414 67.9
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.2e-162 577.0 429 67.1
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 6.1e-159 564.7 411 67.9
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 1.4e-158 563.5 370 73.2
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 2.3e-158 562.8 410 66.8
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 4.9e-156 555.1 416 64.4
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 1.8e-150 536.6 379 71.2
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 4.0e-150 535.4 316 79.4
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.2e-149 533.9 384 68.8
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 8.3e-148 527.7 408 66.9
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 5.4e-147 525.0 373 68.1
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 3.5e-146 522.3 375 67.7
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 5.2e-142 508.4 341 71.8
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 6.8e-142 508.1 317 74.1
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 8.3e-140 501.1 329 71.7
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 1.9e-139 500.0 317 72.2
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 3.2e-139 499.2 420 57.4
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 4.6e-138 495.4 418 58.4
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 8.6e-137 491.1 311 72.3
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 9.5e-136 487.6 408 55.6
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 5.4e-131 471.9 313 70.9
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 1.2e-130 470.7 313 68.7
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 2.7e-130 469.5 430 53.3
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 9.6e-128 461.1 282 78.0
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 2.1e-127 459.9 296 75.7
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 5.1e-113 412.1 265 72.1
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 5.8e-101 372.1 444 43.9
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 2.1e-98 363.6 255 72.9
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.1e-96 357.8 276 58.7
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 5.7e-96 355.5 232 72.8
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 2.3e-89 333.6 439 42.1
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 6.3e-87 325.5 276 60.1
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 8.5e-84 315.1 181 81.8
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 4.5e-77 292.7 402 39.3
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 1.9e-67 260.8 372 39.8
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.3e-60 238.0 458 33.0
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 4.1e-54 216.5 316 40.2
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 6.8e-25 119.4 90 68.9
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 8.9e-25 119.0 110 56.4
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 6.6e-20 102.8 85 57.6
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 5.6e-19 99.8 81 61.7
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 1.3e-15 88.6 47 76.6
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 3.5e-13 80.5 88 55.7
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 1.0e-12 79.0 89 50.6
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 1.5e-11 75.1 128 38.3
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 3.4e-08 63.9 54 53.7
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.9e-06 58.2 89 41.6


User provided reference genes

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