Gene: PGR119G0371

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR119G0371
  • Transcript Identifier PGR119G0371.03
  • Gene Type Coding gene
  • Location NC_045132.1 : 27056640-27059663 : positive

Gene Family Information

  • ID HOM05D006124
  • #Genes/#Species 129/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031400923.1
  • name LOC116210917
  • name XM_031545063.1
  • id gene-LOC116210917
  • uniprot A0A2I0J6X7

Descriptions

  • product general transcription factor IIH subunit 2, transcript variant X4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
GOA Databasenucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006357
ISO
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II AT1G05055

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000439
IEA
GOA Databasetranscription factor TFIIH core complex
GO:0000439
IEA
InterProtranscription factor TFIIH core complex
GO:0005675
IEA
GOA Databasetranscription factor TFIIH holo complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036465 von Willebrand factor A-like domain superfamily
IPR002035 von Willebrand factor, type A
IPR012170 TFIIH subunit Ssl1/p44
IPR007198 Ssl1-like
Mapman id Description
14.6.3.2.2 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit SSL1
15.3.3.5.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component SSL1