Gene: PGSC0003DMG401027913

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG401027913
  • Transcript Identifier PGSC0003DMT400071757
  • Gene Type Coding gene
  • Location ST4.03ch04 : 52052558-52054329 : positive

Gene Family Information

  • ID HOM05D006124
  • #Genes/#Species 129/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37474739
  • id PGSC0003DMG401027913.v4.03
  • uniprot M1CP91

Descriptions

  • Description Btf
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IBA
IEA
GOA Databasenucleotide-excision repair
GO:0006357
IBA
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006281
ISO
PLAZA Homology (enrichment)DNA repair HOM05D006124
GO:0006351
ISO
PLAZA Homology (enrichment)transcription, DNA-templated HOM05D006124

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D006124

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005675
IBA
IEA
GOA Databasetranscription factor TFIIH holo complex
GO:0000439
ISO
PLAZA Homology (enrichment)transcription factor TFIIH core complex HOM05D006124

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007198 Ssl1-like
IPR002035 von Willebrand factor, type A
IPR036465 von Willebrand factor A-like domain superfamily
Mapman id Description
14.6.3.2.2 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit SSL1
15.3.3.5.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component SSL1