Gene: Solyc08g028693.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g028693.1
  • Transcript Identifier Solyc08g028693.1.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 42490613-42491501 : negative

Gene Family Information

  • ID HOM05D006124
  • #Genes/#Species 129/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g028693.1.1
  • gene_id Solyc08g028693

Descriptions

  • Description General transcription factor IIH subunit (AHRD V3.3 *-* A0A2G2XQE2_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
ISO
PLAZA Homology (enrichment)DNA repair HOM05D006124
GO:0006351
ISO
PLAZA Homology (enrichment)transcription, DNA-templated HOM05D006124
GO:0006289
ISO
PLAZA Integrative Orthologynucleotide-excision repair AT1G05055
GO:0006357
ISO
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II AT1G05055

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D006124

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000439
ISO
PLAZA Homology (enrichment)transcription factor TFIIH core complex HOM05D006124
GO:0005675
ISO
PLAZA Integrative Orthologytranscription factor TFIIH holo complex AT1G05055

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036465 von Willebrand factor A-like domain superfamily
IPR007198 Ssl1-like
Mapman id Description
14.6.3.2.2 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit SSL1
15.3.3.5.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component SSL1