Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 1.3e-235 819.3 405 100.0
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 8.8e-176 620.5 555 64.5
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 1.1e-138 497.3 546 53.8
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 4.7e-137 491.9 568 51.8
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 4.0e-136 488.8 495 57.0
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 1.4e-133 480.3 496 55.4
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 4.2e-133 478.8 516 54.3
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 7.1e-133 478.0 494 55.3
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 7.1e-133 478.0 495 55.4
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 9.3e-133 477.6 494 55.9
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 2.1e-132 476.5 494 55.7
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 3.5e-132 475.7 494 55.5
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 3.5e-132 475.7 494 55.7
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 6.0e-132 474.9 492 56.3
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 7.8e-132 474.6 446 60.3
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 1.0e-131 474.2 498 55.2
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 2.3e-131 473.0 495 55.2
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 5.1e-131 471.9 494 55.3
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 5.1e-131 471.9 492 55.1
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 6.6e-131 471.5 505 54.5
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 1.1e-130 470.7 540 52.2
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 1.9e-130 469.9 440 59.8
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 2.5e-130 469.5 505 54.1
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 4.3e-130 468.8 492 54.9
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 4.3e-130 468.8 561 50.6
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 7.3e-130 468.0 508 53.9
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 1.3e-129 467.2 495 55.4
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 1.6e-129 466.8 492 55.5
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 1.6e-129 466.8 494 54.5
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 1.6e-129 466.8 499 54.3
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 2.8e-129 466.1 529 52.2
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 4.8e-129 465.3 498 54.6
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 1.1e-128 464.2 529 52.0
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 1.4e-128 463.8 504 54.2
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 5.3e-128 461.8 495 54.1
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 5.3e-128 461.8 494 54.7
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 5.3e-128 461.8 494 54.5
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 6.9e-128 461.5 499 53.9
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 9.0e-128 461.1 510 53.7
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 1.2e-127 460.7 494 53.6
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 1.5e-127 460.3 508 53.5
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 2.6e-127 459.5 503 53.5
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 2.6e-127 459.5 428 59.8
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 2.6e-127 459.5 493 54.2
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 3.4e-127 459.1 461 57.5
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 3.4e-127 459.1 518 53.1
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 3.4e-127 459.1 461 57.3
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 4.5e-127 458.8 507 53.6
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 4.5e-127 458.8 497 52.9
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 4.5e-127 458.8 492 54.1
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 7.6e-127 458.0 504 53.8
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 9.9e-127 457.6 492 53.5
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 3.8e-126 455.7 495 54.1
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 6.4e-126 454.9 517 52.4
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 6.4e-126 454.9 506 53.0
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 8.4e-126 454.5 503 53.1
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 8.4e-126 454.5 492 54.3
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 8.4e-126 454.5 501 52.5
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 1.1e-125 454.1 506 53.0
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 1.1e-125 454.1 500 52.4
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 1.1e-125 454.1 495 53.3
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 1.1e-125 454.1 497 52.5
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 1.4e-125 453.8 503 52.9
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 1.4e-125 453.8 498 52.6
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 2.4e-125 453.0 492 54.1
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.4e-125 453.0 492 54.1
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 2.4e-125 453.0 492 53.7
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 4.2e-125 452.2 496 53.4
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 7.1e-125 451.4 550 49.6
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 9.3e-125 451.1 495 52.7
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 9.3e-125 451.1 501 52.1
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 9.3e-125 451.1 494 52.6
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 2.1e-124 449.9 494 52.8
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 1.0e-123 447.6 463 54.9
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 3.9e-123 445.7 496 52.2
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 1.1e-122 444.1 466 55.4
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 1.9e-122 443.4 530 50.8
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 2.5e-122 443.0 527 49.9
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 4.3e-122 442.2 492 53.7
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 2.1e-121 439.9 532 50.4
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 4.8e-121 438.7 493 52.1
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 3.1e-120 436.0 448 55.6
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 5.3e-120 435.3 482 52.9
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 2.0e-119 433.3 534 48.7
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 7.6e-119 431.4 493 52.7
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 1.1e-117 427.6 487 51.3
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.1e-117 427.6 507 51.9
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 1.1e-117 427.6 487 51.5
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 7.1e-117 424.9 496 51.6
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 4.3e-114 415.6 478 52.1
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.8e-113 412.9 465 52.9
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 3.4e-111 406.0 581 44.9
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 7.6e-111 404.8 399 55.1
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 6.5e-110 401.7 415 56.6
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 4.6e-108 395.6 478 50.4
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 3.9e-107 392.5 445 53.3
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 9.7e-106 387.9 454 52.2
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 2.2e-105 386.7 500 46.2
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 1.7e-102 377.1 427 48.5
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 2.9e-102 376.3 427 50.4
CDE12G0672 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 2.7e-100 369.8 372 55.6
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 1.4e-96 357.5 434 48.4
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 1.2e-92 344.4 401 52.1
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 3.7e-89 332.8 452 44.0
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 2.4e-88 330.1 456 43.0
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 2.2e-86 323.6 497 40.6
Atru.chr2.2913 Acer truncatum HOM05D005363 ORTHO05D006607 7.2e-85 318.5 331 53.8
Ca_01813_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 3.1e-72 276.6 346 47.4
Cre12.g556911 Chlamydomonas reinhardtii HOM05D005363 ORTHO05D006607 9.1e-64 248.4 498 34.3
MCO13G379 Micromonas commoda HOM05D005363 ORTHO05D006607 4.7e-60 236.1 432 36.1
Eucgr.F01076 Eucalyptus grandis HOM05D005363 ORTHO05D006607 2.2e-57 227.3 270 52.6
Nitab4.5_0007366g0050 Nicotiana tabacum HOM05D005363 ORTHO05D006607 6.3e-57 225.7 282 50.4
Nitab4.5_0007366g0060 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.2e-55 221.5 159 69.8
PGSC0003DMG400002669 Solanum tuberosum HOM05D005363 ORTHO05D006607 2.2e-49 200.7 130 73.8
PRCOL_00003292 Prasinoderma coloniale HOM05D005363 ORTHO05D006607 2.3e-46 190.7 463 32.4
Cfa025591 Carpinus fangiana HOM05D005363 ORTHO05D006607 3.1e-43 180.3 440 28.6
SEGI_22122 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 4.3e-37 159.8 144 56.2
SEGI_32923 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 7.5e-34 149.1 93 75.3
Atru.chr2.2912 Acer truncatum HOM05D005363 ORTHO05D006607 1.7e-30 137.9 183 47.5
CDE12G0057 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 7.8e-23 112.5 101 58.4
CDE12G0011 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.6e-20 104.8 76 78.9
Eucgr.C01186 Eucalyptus grandis HOM05D005363 ORTHO05D006607 2.4e-19 100.9 157 46.5
MBI09_g27609_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 1.5e-18 98.2 100 52.0
CAN.G397.4 Capsicum annuum HOM05D005363 ORTHO05D006607 3.9e-14 83.6 263 28.9
GSVIVG01001519001 Vitis vinifera HOM05D005363 ORTHO05D006607 3.9e-06 57.0 113 40.7


User provided reference genes

Program Settings