Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.S1GY7D Arachis hypogaea HOM05D005767 ORTHO05D006785 2.5e-89 332.0 163 100.0
arahy.Tifrunner.gnm1.ann1.12F6XV Arachis hypogaea HOM05D005767 ORTHO05D006785 4.4e-41 171.8 168 56.5
arahy.Tifrunner.gnm1.ann1.G0D851 Arachis hypogaea HOM05D005767 ORTHO05D006785 4.4e-41 171.8 168 56.5
Lj4g0015609 Lotus japonicus HOM05D005767 ORTHO05D006785 8.0e-35 151.0 171 47.4
Glyma.02G048200 Glycine max HOM05D005767 ORTHO05D006785 3.7e-32 142.1 168 46.4
TPR.G27975 Trifolium pratense HOM05D005767 ORTHO05D006785 3.7e-32 142.1 171 46.2
Medtr8g075810 Medicago truncatula HOM05D005767 ORTHO05D006785 3.1e-31 139.0 171 46.2
Phvul.003G261600 Phaseolus vulgaris HOM05D005767 ORTHO05D006785 5.4e-31 138.3 138 53.6
Ca_22378_v3 Cicer arietinum L. HOM05D005767 ORTHO05D006785 1.6e-30 136.7 171 45.0
VMungo0251G0680 Vigna mungo HOM05D005767 ORTHO05D006785 4.5e-30 135.2 168 45.8
HanXRQChr09g0256711 Helianthus annuus HOM05D005767 ORTHO05D006785 2.8e-27 125.9 174 40.2
GSVIVG01018776001 Vitis vinifera HOM05D005767 ORTHO05D006785 4.7e-27 125.2 168 43.5
QL06p032910 Quercus lobata HOM05D005767 ORTHO05D006785 2.3e-26 122.9 174 42.0
Haze_03760 Corylus avellana HOM05D005767 ORTHO05D006785 4.0e-26 122.1 174 40.8
CiPaw.07G058900 Carya illinoinensis HOM05D005767 ORTHO05D006785 5.2e-26 121.7 174 42.0
Lsat_1_v5_gn_4_144841 Lactuca sativa HOM05D005767 ORTHO05D006785 6.8e-26 121.3 174 41.4
Peaxi162Scf00050g00215 Petunia axillaris HOM05D005767 ORTHO05D006785 1.5e-25 120.2 163 41.7
Thecc.01G018100 Theobroma cacao HOM05D005767 ORTHO05D006785 2.6e-25 119.4 168 42.3
Nn1g05917 Nelumbo nucifera HOM05D005767 ORTHO05D006785 5.7e-25 118.2 174 39.1
CAN.G1735.5 Capsicum annuum HOM05D005767 ORTHO05D006785 7.5e-25 117.9 171 40.9
ECA232G4495 Erigeron canadensis HOM05D005767 ORTHO05D006785 9.8e-25 117.5 174 39.7
COL.COLO4_21902 Corchorus olitorius HOM05D005767 ORTHO05D006785 1.3e-24 117.1 171 41.5
PSO541G2118 Papaver somniferum HOM05D005767 ORTHO05D006785 1.3e-24 117.1 174 37.4
Duzib147G1641 Durio zibethinus HOM05D005767 ORTHO05D006785 1.7e-24 116.7 147 49.0
Nitab4.5_0006119g0040 Nicotiana tabacum HOM05D005767 ORTHO05D006785 1.7e-24 116.7 171 40.4
RcHm_v2.0_Chr2g0099381 Rosa chinensis HOM05D005767 ORTHO05D006785 2.2e-24 116.3 175 40.0
Gohir.D11G182500 Gossypium hirsutum HOM05D005767 ORTHO05D006785 2.8e-24 115.9 174 42.0
Nitab4.5_0000438g0060 Nicotiana tabacum HOM05D005767 ORTHO05D006785 2.8e-24 115.9 181 38.1
Cc07_g10770 Coffea canephora HOM05D005767 ORTHO05D006785 3.7e-24 115.5 168 39.9
Sopen03g006310 Solanum pennellii HOM05D005767 ORTHO05D006785 3.7e-24 115.5 171 39.2
Atru.chr3.804 Acer truncatum HOM05D005767 ORTHO05D006785 4.9e-24 115.2 174 39.1
Gohir.A11G175000 Gossypium hirsutum HOM05D005767 ORTHO05D006785 4.9e-24 115.2 174 42.0
FvH4_1g11761 Fragaria vesca HOM05D005767 ORTHO05D006785 6.3e-24 114.8 175 39.4
FAN19G2575 Fragaria x ananassa HOM05D005767 ORTHO05D006785 8.3e-24 114.4 175 39.4
Gorai.007G194300 Gossypium raimondii HOM05D005767 ORTHO05D006785 1.1e-23 114.0 174 42.0
Potri.007G057400 Populus trichocarpa HOM05D005767 ORTHO05D006785 1.1e-23 114.0 168 39.9
BcaNung00769 Brassica carinata HOM05D005767 ORTHO05D006785 1.8e-23 113.2 154 40.3
TAR376G0924 Trochodendron aralioides HOM05D005767 ORTHO05D006785 1.8e-23 113.2 174 36.8
FAN26G2808 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.4e-23 112.8 167 40.7
FAN26G3405 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.4e-23 112.8 148 44.6
Manes.01G146000 Manihot esculenta HOM05D005767 ORTHO05D006785 2.4e-23 112.8 174 39.7
Sabra07G0049300 Salix brachista HOM05D005767 ORTHO05D006785 2.4e-23 112.8 168 39.3
Lj2C469G1 Lonicera japonica HOM05D005767 ORTHO05D006785 3.2e-23 112.5 174 39.1
CSS0010624 Camellia sinensis var. sinensis HOM05D005767 ORTHO05D006785 4.1e-23 112.1 168 38.7
AUR62003364 Chenopodium quinoa HOM05D005767 ORTHO05D006785 4.1e-23 112.1 168 38.7
AUR62029469 Chenopodium quinoa HOM05D005767 ORTHO05D006785 4.1e-23 112.1 168 38.7
PGR119G2148 Punica granatum HOM05D005767 ORTHO05D006785 4.1e-23 112.1 174 37.9
Aqoxy6G02211 Aquilegia oxysepala HOM05D005767 ORTHO05D006785 5.4e-23 111.7 174 37.4
Carub.0007s0418 Capsella rubella HOM05D005767 ORTHO05D006785 5.4e-23 111.7 168 37.5
Solyc03g033530.4 Solanum lycopersicum HOM05D005767 ORTHO05D006785 5.4e-23 111.7 171 38.6
Oeu035312.2 Olea europaea HOM05D005767 ORTHO05D006785 9.2e-23 110.9 165 38.8
Sed0019779 Sechium edule HOM05D005767 ORTHO05D006785 9.2e-23 110.9 178 36.0
MELO3C007906.2 Cucumis melo HOM05D005767 ORTHO05D006785 2.0e-22 109.8 178 36.0
CsaV3_6G047130 Cucumis sativus L. HOM05D005767 ORTHO05D006785 2.7e-22 109.4 178 36.0
ATR0810G226 Amborella trichopoda HOM05D005767 ORTHO05D006785 4.5e-22 108.6 185 35.1
MBI09_g09407_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 4.5e-22 108.6 171 37.4
SGA_v2.0_scaffold76G25121 Striga asiatica HOM05D005767 ORTHO05D006785 4.5e-22 108.6 166 41.0
arahy.Tifrunner.gnm1.ann1.R2J7CI Arachis hypogaea HOM05D005767 ORTHO05D006785 7.8e-22 107.8 52 96.2
C01p02980 Brassica napus HOM05D005767 ORTHO05D006785 1.0e-21 107.5 169 36.7
BolC1t00284H Brassica oleracea HOM05D005767 ORTHO05D006785 1.0e-21 107.5 169 36.7
BraA01t00254Z Brassica rapa HOM05D005767 ORTHO05D006785 1.0e-21 107.5 169 36.7
Ciclev10025146m.g Citrus clementina HOM05D005767 ORTHO05D006785 1.0e-21 107.5 190 36.3
Migut.N01741 Erythranthe guttata HOM05D005767 ORTHO05D006785 1.0e-21 107.5 166 38.6
TWI73G0295 Tripterygium wilfordii HOM05D005767 ORTHO05D006785 1.0e-21 107.5 165 39.4
MSTRG.23406 Avicennia marina HOM05D005767 ORTHO05D006785 1.3e-21 107.1 166 39.2
HPP92_005447 Vanilla planifolia HOM05D005767 ORTHO05D006785 1.3e-21 107.1 170 36.5
AL7G15000 Arabidopsis lyrata HOM05D005767 ORTHO05D006785 1.7e-21 106.7 168 36.3
Cpa.g.sc6.256 Carica papaya HOM05D005767 ORTHO05D006785 1.7e-21 106.7 168 38.7
Dinv33631 Davidia involucrata HOM05D005767 ORTHO05D006785 1.7e-21 106.7 187 35.8
A01p02680 Brassica napus HOM05D005767 ORTHO05D006785 2.3e-21 106.3 174 35.6
Ah.03g148810 Amaranthus hybridus HOM05D005767 ORTHO05D006785 2.9e-21 105.9 167 37.1
Thhalv10024709m.g Eutrema salsugineum HOM05D005767 ORTHO05D006785 5.0e-21 105.1 168 36.3
MD02G1131900 Malus domestica HOM05D005767 ORTHO05D006785 5.0e-21 105.1 171 37.4
Prupe.7G168600 Prunus persica HOM05D005767 ORTHO05D006785 6.6e-21 104.8 171 38.6
vmacro22135 Vaccinium macrocarpon HOM05D005767 ORTHO05D006785 6.6e-21 104.8 144 40.3
AT4G36050 Arabidopsis thaliana HOM05D005767 ORTHO05D006785 8.6e-21 104.4 168 35.7
DCAR_026000 Daucus carota HOM05D005767 ORTHO05D006785 8.6e-21 104.4 165 37.6
Sp7g33830 Schrenkiella parvula HOM05D005767 ORTHO05D006785 1.5e-20 103.6 168 35.7
Aa31LG6G13010 Aethionema arabicum HOM05D005767 ORTHO05D006785 9.5e-20 100.9 168 35.1
Sc16g0002260 Simmondsia chinensis HOM05D005767 ORTHO05D006785 1.2e-19 100.5 168 34.5
Lalb_Chr05g0229861 Lupinus albus HOM05D005767 ORTHO05D006785 2.8e-19 99.4 57 73.7
SHI08521 Sapria himalayana HOM05D000565 ORTHO05D002009 3.6e-19 99.0 176 38.1
Psat4g100320 Pisum sativum HOM05D005767 ORTHO05D006785 8.0e-19 97.8 57 77.2
Os09g0536000 Oryza sativa ssp. japonica HOM05D005767 ORTHO05D006785 1.8e-18 96.7 171 33.9
ClCG01G020330 Citrullus lanatus HOM05D005767 ORTHO05D006785 2.3e-18 96.3 235 30.2
Hund16493 Selenicereus undatus HOM05D005767 ORTHO05D006785 3.1e-18 95.9 172 34.3
SMO290G0007 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 4.4e-17 92.0 152 35.5
Psat7g239040 Pisum sativum HOM05D005767 ORTHO05D006785 5.8e-17 91.7 49 83.7
Rhsim10G0211700 Rhododendron simsii HOM05D005767 ORTHO05D006785 7.5e-17 91.3 183 32.2
arahy.Tifrunner.gnm1.ann1.JHI6E6 Arachis hypogaea HOM05D005767 ORTHO05D006785 6.4e-16 88.2 40 97.5
SMO356G0595 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 7.0e-15 84.7 181 30.9
Hma1.2p1_1115F.1_g258820 Hydrangea macrophylla HOM05D005767 ORTHO05D006785 9.2e-15 84.3 166 31.3
Mapoly0107s0007 Marchantia polymorpha HOM05D005767 ORTHO05D006785 4.6e-14 82.0 173 30.1
Lalb_Chr05g0229851 Lupinus albus HOM05D005767 ORTHO05D006785 1.7e-13 80.1 48 77.1
AagrBONN_evm.TU.Sc2ySwM_344.3375 Anthoceros agrestis HOM05D005767 ORTHO05D006785 3.0e-13 79.3 170 31.2
CDE04G0100 Ceratophyllum demersum HOM05D005767 ORTHO05D006785 3.9e-13 79.0 158 31.0
Glyma.16G128500 Glycine max HOM05D005767 ORTHO05D006785 1.9e-12 76.6 70 58.6
FAN28G0764 Fragaria x ananassa HOM05D005767 ORTHO05D006785 1.2e-11 73.9 44 70.5
unitig_32.g10945 Utricularia gibba HOM05D005767 ORTHO05D006785 2.8e-11 72.8 162 31.5
Pp3c17_13320 Physcomitrium patens HOM05D005767 ORTHO05D006785 8.9e-10 67.8 58 53.4
SEGI_12703 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 8.9e-10 67.8 48 56.2
CBR_g18710 Chara braunii HOM05D005767 ORTHO05D006785 9.8e-09 64.3 50 56.0
SMO356G0427 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 9.8e-09 64.3 67 47.8
Actinidia22973 Actinidia chinensis HOM05D005767 ORTHO05D006785 1.7e-08 63.5 81 44.4
Lsat_1_v5_gn_9_7060 Lactuca sativa HOM05D005767 ORTHO05D006785 8.3e-08 61.2 56 53.6
Eucgr.I02343 Eucalyptus grandis HOM05D005767 ORTHO05D006785 4.6e-06 55.5 48 60.4
Potri.005G113301 Populus trichocarpa HOM05D005767 ORTHO05D006785 7.8e-06 54.7 48 54.2


User provided reference genes

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