Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.QP8TMD Arachis hypogaea HOM05D012495 ORTHO05D013764 2.4e-209 731.9 362 100.0
arahy.Tifrunner.gnm1.ann1.59X1DS Arachis hypogaea HOM05D012495 ORTHO05D013764 3.4e-134 482.3 278 88.5
arahy.Tifrunner.gnm1.ann1.1I9988 Arachis hypogaea HOM05D012495 ORTHO05D082650 3.4e-110 402.5 248 82.3
arahy.Tifrunner.gnm1.ann1.6GSA8E Arachis hypogaea HOM05D012495 ORTHO05D011037 8.4e-85 318.2 248 62.5
arahy.Tifrunner.gnm1.ann1.PP2J7J Arachis hypogaea HOM05D012495 ORTHO05D011037 2.2e-77 293.5 243 61.3
arahy.Tifrunner.gnm1.ann1.X09WXA Arachis hypogaea HOM05D012495 ORTHO05D013764 9.6e-73 278.1 238 58.0
arahy.Tifrunner.gnm1.ann1.1SP54C Arachis hypogaea HOM05D012495 ORTHO05D013764 2.9e-61 240.0 217 56.2
arahy.Tifrunner.gnm1.ann1.12W76F Arachis hypogaea HOM05D012495 ORTHO05D013764 4.6e-59 232.6 178 67.4
arahy.Tifrunner.gnm1.ann1.Y1GJYY Arachis hypogaea HOM05D012495 ORTHO05D013764 4.1e-39 166.4 156 54.5
arahy.Tifrunner.gnm1.ann1.PWJB0D Arachis hypogaea HOM05D015655 ORTHO05D013764 8.8e-34 148.7 229 35.8
arahy.Tifrunner.gnm1.ann1.AZ4556 Arachis hypogaea HOM05D006053 ORTHO05D008381 1.3e-29 134.8 75 88.0
arahy.Tifrunner.gnm1.ann1.JRYV00 Arachis hypogaea HOM05D006053 ORTHO05D008381 1.3e-29 134.8 75 88.0
arahy.Tifrunner.gnm1.ann1.Q87YVY Arachis hypogaea HOM05D012495 ORTHO05D013764 6.5e-29 132.5 201 39.8
arahy.Tifrunner.gnm1.ann1.PPR302 Arachis hypogaea HOM05D012495 ORTHO05D013764 3.1e-23 113.6 179 40.2
arahy.Tifrunner.gnm1.ann1.SP065T Arachis hypogaea HOM05D015655 ORTHO05D013764 1.3e-21 108.2 229 30.6
Phvul.007G011000 Phaseolus vulgaris HOM05D006053 ORTHO05D008381 1.3e-21 108.2 64 81.2
VMungo0720G3082 Vigna mungo HOM05D006053 ORTHO05D008381 1.7e-21 107.8 64 82.8
arahy.Tifrunner.gnm1.ann1.GV34QU Arachis hypogaea HOM05D015655 ORTHO05D013764 4.2e-20 103.2 132 40.2
arahy.Tifrunner.gnm1.ann1.206G2A Arachis hypogaea HOM05D015655 ORTHO05D013764 9.5e-20 102.1 229 30.1
Lalb_Chr06g0164221 Lupinus albus HOM05D006053 ORTHO05D008381 1.6e-19 101.3 59 81.4
Actinidia02973 Actinidia chinensis HOM05D006053 ORTHO05D008381 1.4e-18 98.2 62 79.0
Glyma.10G290400 Glycine max HOM05D006053 ORTHO05D008381 1.4e-18 98.2 67 76.1
arahy.Tifrunner.gnm1.ann1.H3CCD9 Arachis hypogaea HOM05D010765 ORTHO05D011037 1.8e-18 97.8 259 29.0
CSS0026153 Camellia sinensis var. sinensis HOM05D006053 ORTHO05D008381 2.3e-18 97.4 62 77.4
vmacro07150 Vaccinium macrocarpon HOM05D006053 ORTHO05D008381 2.3e-18 97.4 65 75.4
arahy.Tifrunner.gnm1.ann1.YP0IRR Arachis hypogaea HOM05D015655 ORTHO05D013764 5.2e-18 96.3 229 30.1
arahy.Tifrunner.gnm1.ann1.DM0EEB Arachis hypogaea HOM05D015655 ORTHO05D013764 6.8e-18 95.9 198 28.3
Lj5g0015550 Lotus japonicus HOM05D006053 ORTHO05D008381 6.8e-18 95.9 78 64.1
arahy.Tifrunner.gnm1.ann1.HJ8AGK Arachis hypogaea HOM05D010765 ORTHO05D011037 1.2e-17 95.1 258 27.9
Glyma.20G098800 Glycine max HOM05D006053 ORTHO05D008381 1.2e-17 95.1 66 74.2
MD07G1191600 Malus domestica HOM05D006053 ORTHO05D008381 1.5e-17 94.7 54 83.3
RhsimUnG0003300 Rhododendron simsii HOM05D006053 ORTHO05D008381 1.5e-17 94.7 72 68.1
TPR.G14004 Trifolium pratense HOM05D006053 ORTHO05D008381 1.5e-17 94.7 65 69.2
arahy.Tifrunner.gnm1.ann1.FT3RR1 Arachis hypogaea HOM05D012495 ORTHO05D084346 2.0e-17 94.4 73 64.4
Dinv25975 Davidia involucrata HOM05D006053 ORTHO05D008381 2.0e-17 94.4 61 75.4
GSVIVG01016604001 Vitis vinifera HOM05D006053 ORTHO05D008381 2.0e-17 94.4 61 75.4
Lj8C88T8 Lonicera japonica HOM05D006053 ORTHO05D008381 2.6e-17 94.0 64 71.9
PGR142G2322 Punica granatum HOM05D006053 ORTHO05D008381 2.6e-17 94.0 124 46.0
Prupe.2G229600 Prunus persica HOM05D006053 ORTHO05D008381 4.4e-17 93.2 71 67.6
Rhsim03G0127000 Rhododendron simsii HOM05D006053 ORTHO05D008381 4.4e-17 93.2 62 74.2
Prupe.2G229700 Prunus persica HOM05D006053 ORTHO05D008381 5.7e-17 92.8 63 71.4
CDE02G2651 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 7.5e-17 92.4 51 84.3
Manes.10G035900 Manihot esculenta HOM05D006053 ORTHO05D008381 7.5e-17 92.4 61 75.4
TWI63G0066 Tripterygium wilfordii HOM05D006053 ORTHO05D008381 7.5e-17 92.4 78 62.8
CDE09G1153 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 9.8e-17 92.0 61 73.8
Cc02_g08350 Coffea canephora HOM05D006053 ORTHO05D008381 9.8e-17 92.0 77 62.3
Oeu056126.3 Olea europaea HOM05D006053 ORTHO05D008381 9.8e-17 92.0 61 75.4
Hund20006 Selenicereus undatus HOM05D006053 ORTHO05D008381 9.8e-17 92.0 65 69.2
arahy.Tifrunner.gnm1.ann1.8JH4UL Arachis hypogaea HOM05D010765 ORTHO05D011037 1.3e-16 91.7 223 28.7
Medtr1g115375 Medicago truncatula HOM05D006053 ORTHO05D008381 1.3e-16 91.7 65 67.7
Hma1.2p1_0192F.1_g083600 Hydrangea macrophylla HOM05D006053 ORTHO05D008381 1.7e-16 91.3 64 71.9
Hma1.2p1_0192F.1_g083610 Hydrangea macrophylla HOM05D006053 ORTHO05D008381 1.7e-16 91.3 64 71.9
DCAR_015208 Daucus carota HOM05D006053 ORTHO05D008381 2.8e-16 90.5 59 72.9
Eucgr.G02908 Eucalyptus grandis HOM05D006053 ORTHO05D008381 2.8e-16 90.5 62 74.2
MD01G1122100 Malus domestica HOM05D006053 ORTHO05D008381 2.8e-16 90.5 72 63.9
Psat6g236560 Pisum sativum HOM05D006053 ORTHO05D008381 3.7e-16 90.1 65 66.2
MBI05_g35605_MAGBIO Magnolia biondii HOM05D006053 ORTHO05D008381 4.9e-16 89.7 61 70.5
Nn2g10473 Nelumbo nucifera HOM05D006053 ORTHO05D008381 4.9e-16 89.7 61 70.5
TAR623G1578 Trochodendron aralioides HOM05D006053 ORTHO05D008381 4.9e-16 89.7 63 71.4
QL08p058728 Quercus lobata HOM05D006053 ORTHO05D008381 6.3e-16 89.4 65 73.8
SHI22531 Sapria himalayana HOM05D006053 ORTHO05D008381 6.3e-16 89.4 51 82.4
CiPaw.02G181100 Carya illinoinensis HOM05D006053 ORTHO05D008381 8.3e-16 89.0 75 61.3
Peaxi162Scf00408g00034 Petunia axillaris HOM05D006053 ORTHO05D008381 1.1e-15 88.6 58 72.4
ClCG07G003140 Citrullus lanatus HOM05D006053 ORTHO05D008381 1.4e-15 88.2 51 82.4
arahy.Tifrunner.gnm1.ann1.DSW94B Arachis hypogaea HOM05D015655 ORTHO05D013764 1.8e-15 87.8 101 43.6
MELO3C023836.2 Cucumis melo HOM05D006053 ORTHO05D008381 1.8e-15 87.8 51 80.4
CsaV3_5G006870 Cucumis sativus L. HOM05D006053 ORTHO05D008381 1.8e-15 87.8 51 80.4
Nitab4.5_0000120g0180 Nicotiana tabacum HOM05D006053 ORTHO05D008381 1.8e-15 87.8 64 67.2
Sabra10G0162000 Salix brachista HOM05D006053 ORTHO05D008381 1.8e-15 87.8 54 77.8
PGSC0003DMG400031213 Solanum tuberosum HOM05D006053 ORTHO05D008381 1.8e-15 87.8 149 39.6
Potri.010G209701 Populus trichocarpa HOM05D006053 ORTHO05D008381 2.4e-15 87.4 62 71.0
RcHm_v2.0_Chr1g0365851 Rosa chinensis HOM05D006053 ORTHO05D008381 3.1e-15 87.0 67 64.2
PSO339G3195 Papaver somniferum HOM05D006053 ORTHO05D008381 4.1e-15 86.7 61 67.2
PSO384G4800 Papaver somniferum HOM05D006053 ORTHO05D008381 4.1e-15 86.7 61 67.2
ATR0113G011 Amborella trichopoda HOM05D006053 ORTHO05D008381 5.4e-15 86.3 59 71.2
arahy.Tifrunner.gnm1.ann1.QM4LV1 Arachis hypogaea HOM05D010765 ORTHO05D011037 5.4e-15 86.3 208 28.8
Cfa001523 Carpinus fangiana HOM05D006053 ORTHO05D008381 5.4e-15 86.3 65 67.7
Sc20g0002520 Simmondsia chinensis HOM05D006053 ORTHO05D008381 5.4e-15 86.3 69 62.3
Aqoxy2G02006 Aquilegia oxysepala HOM05D006053 ORTHO05D008381 7.0e-15 85.9 51 76.5
Solyc06g018110.3 Solanum lycopersicum HOM05D006053 ORTHO05D008381 7.0e-15 85.9 147 39.5
MSTRG.23542 Avicennia marina HOM05D006053 ORTHO05D008381 9.2e-15 85.5 50 78.0
Haze_17018 Corylus avellana HOM05D006053 ORTHO05D008381 9.2e-15 85.5 50 80.0
FvH4_7g21531 Fragaria vesca HOM05D006053 ORTHO05D008381 9.2e-15 85.5 58 65.5
FAN01G1874 Fragaria x ananassa HOM05D006053 ORTHO05D008381 9.2e-15 85.5 58 65.5
FAN03G0613 Fragaria x ananassa HOM05D006053 ORTHO05D008381 9.2e-15 85.5 67 61.2
FAN06G2982 Fragaria x ananassa HOM05D006053 ORTHO05D008381 9.2e-15 85.5 58 65.5
FAN06G4406 Fragaria x ananassa HOM05D006053 ORTHO05D008381 9.2e-15 85.5 58 65.5
FAN10G2741 Fragaria x ananassa HOM05D006053 ORTHO05D008381 9.2e-15 85.5 58 65.5
SEGI_38671 Sequoiadendron giganteum HOM05D006053 ORTHO05D008381 1.2e-14 85.1 66 63.6
SGA_v2.0_scaffold115G32148 Striga asiatica HOM05D006053 ORTHO05D008381 1.2e-14 85.1 59 71.2
EL10As19g24197 Beta vulgaris HOM05D006053 ORTHO05D008381 1.6e-14 84.7 62 66.1
Sed0000212 Sechium edule HOM05D006053 ORTHO05D008381 1.6e-14 84.7 51 76.5
unitig_699.g19587 Utricularia gibba HOM05D006053 ORTHO05D008381 1.6e-14 84.7 51 76.5
Nitab4.5_0001277g0050 Nicotiana tabacum HOM05D006053 ORTHO05D008381 2.0e-14 84.3 68 61.8
Sopen06g008460 Solanum pennellii HOM05D006053 ORTHO05D008381 2.0e-14 84.3 143 40.6
arahy.Tifrunner.gnm1.ann1.UQH6TX Arachis hypogaea HOM05D010765 ORTHO05D011037 3.5e-14 83.6 208 28.8
Os05g0114500 Oryza sativa ssp. japonica HOM05D006053 ORTHO05D008381 3.5e-14 83.6 80 53.8
HPP92_006599 Vanilla planifolia HOM05D006053 ORTHO05D008381 3.5e-14 83.6 50 76.0
Ah.16g107460 Amaranthus hybridus HOM05D006053 ORTHO05D008381 5.9e-14 82.8 62 66.1
arahy.Tifrunner.gnm1.ann1.HD18YV Arachis hypogaea HOM05D010765 ORTHO05D011037 7.8e-14 82.4 244 27.0
Migut.L00294 Erythranthe guttata HOM05D006053 ORTHO05D008381 7.8e-14 82.4 51 72.5
Thecc.10G048700 Theobroma cacao HOM05D006053 ORTHO05D008381 7.8e-14 82.4 72 59.7
Zm00001eb266400 Zea mays HOM05D006053 ORTHO05D008381 1.0e-13 82.0 50 74.0
Gohir.A10G214200 Gossypium hirsutum HOM05D006053 ORTHO05D008381 1.3e-13 81.6 72 59.7
Gohir.D10G223000 Gossypium hirsutum HOM05D006053 ORTHO05D008381 1.3e-13 81.6 72 59.7
Gorai.011G253900 Gossypium raimondii HOM05D006053 ORTHO05D008381 1.3e-13 81.6 72 59.7
arahy.Tifrunner.gnm1.ann1.E7TSTY Arachis hypogaea HOM05D010765 ORTHO05D011037 1.7e-13 81.3 222 27.0
arahy.Tifrunner.gnm1.ann1.QQ6I31 Arachis hypogaea HOM05D000963 ORTHO05D010201 2.3e-13 80.9 60 60.0
AUR62038385 Chenopodium quinoa HOM05D006053 ORTHO05D008381 2.3e-13 80.9 62 62.9
ECA232G2518 Erigeron canadensis HOM05D006053 ORTHO05D008381 2.3e-13 80.9 51 72.5
Lsat_1_v5_gn_9_66300 Lactuca sativa HOM05D006053 ORTHO05D008381 2.3e-13 80.9 79 54.4
COL.COLO4_14945 Corchorus olitorius HOM05D006053 ORTHO05D008381 3.8e-13 80.1 63 61.9
arahy.Tifrunner.gnm1.ann1.N7YJV9 Arachis hypogaea HOM05D010765 ORTHO05D011037 5.0e-13 79.7 204 25.5
AUR62038388 Chenopodium quinoa HOM05D006053 ORTHO05D008381 6.6e-13 79.3 59 64.4
AUR62022513 Chenopodium quinoa HOM05D006053 ORTHO05D008381 1.5e-12 78.2 54 66.7
HanXRQChr09g0247701 Helianthus annuus HOM05D006053 ORTHO05D008381 1.9e-12 77.8 64 57.8
arahy.Tifrunner.gnm1.ann1.23ZS54 Arachis hypogaea HOM05D012957 ORTHO05D011037 2.5e-12 77.4 243 25.9
arahy.Tifrunner.gnm1.ann1.E2S3DE Arachis hypogaea HOM05D012957 ORTHO05D011037 4.3e-12 76.6 222 27.5
Duzib114G0287 Durio zibethinus HOM05D006053 ORTHO05D008381 4.3e-12 76.6 72 55.6
Cpa.g.sc1.353 Carica papaya HOM05D006053 ORTHO05D008381 7.3e-12 75.9 114 38.6
arahy.Tifrunner.gnm1.ann1.UGT4IE Arachis hypogaea HOM05D010765 ORTHO05D011037 1.6e-11 74.7 134 29.9
arahy.Tifrunner.gnm1.ann1.PDIM12 Arachis hypogaea HOM05D010765 ORTHO05D011037 2.8e-11 73.9 203 27.6
arahy.Tifrunner.gnm1.ann1.AN92IF Arachis hypogaea HOM05D010765 ORTHO05D011037 4.7e-11 73.2 233 25.3
Ciclev10031409m.g Citrus clementina HOM05D006053 ORTHO05D008381 8.0e-11 72.4 72 52.8
Lj5g0000777 Lotus japonicus HOM05D024850 ORTHO05D025768 8.0e-11 72.4 259 24.7
Atru.chr12.522 Acer truncatum HOM05D006053 ORTHO05D008381 1.0e-10 72.0 72 51.4
Pp3c14_1940 Physcomitrium patens HOM05D006053 ORTHO05D008381 1.8e-10 71.2 89 43.8
arahy.Tifrunner.gnm1.ann1.RQPT3Z Arachis hypogaea HOM05D012957 ORTHO05D011037 3.0e-10 70.5 210 27.6
arahy.Tifrunner.gnm1.ann1.FP4H44 Arachis hypogaea HOM05D010765 ORTHO05D011037 4.0e-10 70.1 161 29.2
Carub.0005s2199 Capsella rubella HOM05D006053 ORTHO05D008381 6.8e-10 69.3 65 55.4
TPR.G39857 Trifolium pratense HOM05D016378 ORTHO05D019219 6.8e-10 69.3 114 29.8
arahy.Tifrunner.gnm1.ann1.E47H8F Arachis hypogaea HOM05D015655 ORTHO05D013764 8.9e-10 68.9 167 28.7
BcaB01g00113 Brassica carinata HOM05D006053 ORTHO05D008381 8.9e-10 68.9 79 50.6
A09p48230 Brassica napus HOM05D006053 ORTHO05D008381 8.9e-10 68.9 64 56.2
BraA09t40276Z Brassica rapa HOM05D006053 ORTHO05D008381 8.9e-10 68.9 64 56.2
C08p30500 Brassica napus HOM05D006053 ORTHO05D008381 1.2e-09 68.6 52 63.5
BolC8t50669H Brassica oleracea HOM05D006053 ORTHO05D008381 1.2e-09 68.6 52 63.5
Thhalv10010257m.g Eutrema salsugineum HOM05D006053 ORTHO05D008381 1.2e-09 68.6 52 63.5
Lj6g0015415 Lotus japonicus HOM05D010765 ORTHO05D019219 2.0e-09 67.8 222 26.6
AT3G55340 Arabidopsis thaliana HOM05D006053 ORTHO05D008381 5.8e-09 66.2 60 56.7
CARHR165350 Cardamine hirsuta HOM05D006053 ORTHO05D008381 5.8e-09 66.2 52 57.7
arahy.Tifrunner.gnm1.ann1.419G1H Arachis hypogaea HOM05D012957 ORTHO05D011037 9.8e-09 65.5 266 24.1
Sp5g07130 Schrenkiella parvula HOM05D006053 ORTHO05D008381 9.8e-09 65.5 52 59.6
Aa31LG10G10350 Aethionema arabicum HOM05D006053 ORTHO05D008381 1.3e-08 65.1 78 48.7
TPR.G3872 Trifolium pratense HOM05D016378 ORTHO05D019219 1.7e-08 64.7 135 28.1
Mapoly0121s0015 Marchantia polymorpha HOM05D006053 ORTHO05D008381 2.2e-08 64.3 50 54.0
SMO118G0265 Selaginella moellendorffii HOM05D006053 ORTHO05D008381 2.9e-08 63.9 50 56.0
Lj4g0000181 Lotus japonicus HOM05D007728 ORTHO05D009681 3.7e-08 63.5 220 22.7
Lj4g0001150 Lotus japonicus HOM05D007728 ORTHO05D009681 3.7e-08 63.5 220 22.7
Lj4g0023843 Lotus japonicus HOM05D007728 ORTHO05D009681 3.7e-08 63.5 220 22.7
THA.LOC104824082 Tarenaya hassleriana HOM05D006053 ORTHO05D008381 3.7e-08 63.5 52 53.8
arahy.Tifrunner.gnm1.ann1.9P1157 Arachis hypogaea HOM05D012957 ORTHO05D011037 1.4e-07 61.6 95 36.8
arahy.Tifrunner.gnm1.ann1.DT8224 Arachis hypogaea HOM05D015428 ORTHO05D087386 1.4e-07 61.6 136 28.7
arahy.Tifrunner.gnm1.ann1.JX177G Arachis hypogaea HOM05D015428 ORTHO05D084186 1.4e-07 61.6 136 27.2
TPR.G3843 Trifolium pratense HOM05D016378 ORTHO05D019219 1.4e-07 61.6 147 27.2
AagrBONN_evm.TU.Sc2ySwM_368.1156 Anthoceros agrestis HOM05D006053 ORTHO05D008381 1.9e-07 61.2 50 52.0
Lj1g0019845 Lotus japonicus HOM05D007728 ORTHO05D000140 3.2e-07 60.5 213 22.1
arahy.Tifrunner.gnm1.ann1.IPZJ4D Arachis hypogaea HOM05D012957 ORTHO05D011037 9.2e-07 58.9 128 30.5
arahy.Tifrunner.gnm1.ann1.Q4IKET Arachis hypogaea HOM05D015428 ORTHO05D082224 9.2e-07 58.9 147 27.9
arahy.Tifrunner.gnm1.ann1.QB9XFY Arachis hypogaea HOM05D012957 ORTHO05D011037 3.5e-06 57.0 92 35.9
arahy.Tifrunner.gnm1.ann1.W8RLC7 Arachis hypogaea HOM05D010765 ORTHO05D011037 7.8e-06 55.8 92 31.5


User provided reference genes

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