Gene: Solyc06g018110.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g018110.3
  • Transcript Identifier Solyc06g018110.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 15233888-15239044 : negative

Gene Family Information

  • ID HOM05D006053
  • #Genes/#Species 130/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g018110.3.1
  • uniprot A0A3Q7GT39
  • gene_id Solyc06g018110

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* A0A2U1N2D5_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000914
ISO
PLAZA Integrative Orthologyphragmoplast assembly AT3G55340
GO:0009920
ISO
PLAZA Integrative Orthologycell plate formation involved in plant-type cell wall biogenesis AT3G55340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G55340
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G55340

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019898
ISO
PLAZA Integrative Orthologyextrinsic component of membrane AT3G55340
GO:0009524
ISO
PLAZA Integrative Orthologyphragmoplast AT3G55340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR034362 PHIP1, RNA recognition motif 2
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR001878 Zinc finger, CCHC-type
IPR036875 Zinc finger, CCHC-type superfamily
IPR034361 PHIP1, RNA recognition motif 1
Mapman id Description
13.4.2.7 Cell cycle organisation.cytokinesis.cell-plate formation.phragmoplastin-interacting factor (PHIP1)