Gene: PSO339G3195
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO339G3195
- Transcript Identifier PSO339G3195.01
- Gene Type Coding gene
- Location NC_039366.1 : 145348530-145353459 : negative
Gene Family Information
- ID HOM05D006053
- #Genes/#Species 130/95
- Phylogenetic origin
- ID ORTHO05D008381
- #Genes/#Species 120/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026559811.1
- pid XP_026415596.1
- id gene-LOC113310980
Descriptions
- product protein gar2-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000914 | ISO | PLAZA Integrative Orthology | phragmoplast assembly | AT3G55340 |
GO:0009920 | ISO | PLAZA Integrative Orthology | cell plate formation involved in plant-type cell wall biogenesis | AT3G55340 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G55340 |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G55340 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0019898 | ISO | PLAZA Integrative Orthology | extrinsic component of membrane | AT3G55340 |
GO:0009524 | ISO | PLAZA Integrative Orthology | phragmoplast | AT3G55340 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR001878 | Zinc finger, CCHC-type |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
IPR035979 | RNA-binding domain superfamily |
IPR036875 | Zinc finger, CCHC-type superfamily |
IPR034362 | PHIP1, RNA recognition motif 2 |
IPR034361 | PHIP1, RNA recognition motif 1 |
IPR000504 | RNA recognition motif domain |
Mapman id | Description |
---|---|
13.4.2.7 | Cell cycle organisation.cytokinesis.cell-plate formation.phragmoplastin-interacting factor (PHIP1) |