Gene: Thecc.10G048700
General Information
Structural Information
- Species Theobroma cacao
- Gene Identifier Thecc.10G048700
- Transcript Identifier Thecc.10G048700.1
- Gene Type Coding gene
- Location Chromosome_10 : 2565698-2567969 : negative
Gene Family Information
- ID HOM05D006053
- #Genes/#Species 130/95
- Phylogenetic origin
- ID ORTHO05D008381
- #Genes/#Species 120/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Thecc.10G048700.v2.1
- pacid 42026720
- ancestorIdentifier Thecc1EG042840.CGDv1.1
- ancestorIdentifier Thecc1EG042840t1.CGDv1.1
Descriptions
- Description Phragmoplastin interacting protein 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000914 | ISO | PLAZA Integrative Orthology | phragmoplast assembly | AT3G55340 |
| GO:0009920 | ISO | PLAZA Integrative Orthology | cell plate formation involved in plant-type cell wall biogenesis | AT3G55340 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G55340 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G55340 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019898 | ISO | PLAZA Integrative Orthology | extrinsic component of membrane | AT3G55340 |
| GO:0009524 | ISO | PLAZA Integrative Orthology | phragmoplast | AT3G55340 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR001878 | Zinc finger, CCHC-type |
| IPR000504 | RNA recognition motif domain |
| IPR036875 | Zinc finger, CCHC-type superfamily |
| IPR034361 | PHIP1, RNA recognition motif 1 |
| IPR034362 | PHIP1, RNA recognition motif 2 |
| Mapman id | Description |
|---|---|
| 13.4.2.7 | Cell cycle organisation.cytokinesis.cell-plate formation.phragmoplastin-interacting factor (PHIP1) |