Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Q88MA9 Arachis hypogaea HOM05D006136 ORTHO05D007244 3.0e-72 275.0 135 100.0
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea HOM05D006136 ORTHO05D007244 8.6e-59 230.3 117 94.0
arahy.Tifrunner.gnm1.ann1.27MYTD Arachis hypogaea HOM05D006136 ORTHO05D007244 1.5e-55 219.5 117 90.6
arahy.Tifrunner.gnm1.ann1.QC7K1D Arachis hypogaea HOM05D006136 ORTHO05D007244 3.3e-50 201.8 103 93.2
Lalb_Chr08g0233201 Lupinus albus HOM05D006136 ORTHO05D007244 9.9e-39 163.7 115 64.3
Lj6g0010551 Lotus japonicus HOM05D006136 ORTHO05D007244 1.1e-34 150.2 110 62.7
Medtr2g048340 Medicago truncatula HOM05D006136 ORTHO05D007244 3.6e-33 145.2 105 65.7
Psat1g019160 Pisum sativum HOM05D006136 ORTHO05D007244 8.9e-32 140.6 110 63.6
Sp6g19810 Schrenkiella parvula HOM05D006136 ORTHO05D007244 3.4e-31 138.7 115 59.1
Phvul.009G217200 Phaseolus vulgaris HOM05D006136 ORTHO05D007244 1.7e-30 136.3 117 59.0
GSVIVG01038350001 Vitis vinifera HOM05D006136 ORTHO05D007244 1.7e-30 136.3 101 65.3
Prupe.1G000700 Prunus persica HOM05D006136 ORTHO05D007244 2.2e-30 136.0 99 63.6
Glyma.09G084800 Glycine max HOM05D006136 ORTHO05D007244 3.8e-30 135.2 105 61.9
Glyma.15G193100 Glycine max HOM05D006136 ORTHO05D007244 4.9e-30 134.8 122 54.9
PSO478G4925 Papaver somniferum HOM05D006136 ORTHO05D007244 4.9e-30 134.8 93 66.7
TWI32G0914 Tripterygium wilfordii HOM05D006136 ORTHO05D007244 4.9e-30 134.8 106 59.4
Sc06g0001020 Simmondsia chinensis HOM05D006136 ORTHO05D007244 6.4e-30 134.4 113 59.3
Aqoxy7G02564 Aquilegia oxysepala HOM05D006136 ORTHO05D007244 8.4e-30 134.0 91 64.8
Lsat_1_v5_gn_5_82020 Lactuca sativa HOM05D006136 ORTHO05D007244 8.4e-30 134.0 107 59.8
ECA234G2139 Erigeron canadensis HOM05D006136 ORTHO05D007244 1.1e-29 133.7 114 59.6
HanXRQChr10g0309281 Helianthus annuus HOM05D006136 ORTHO05D007244 1.1e-29 133.7 112 59.8
PSO782G1690 Papaver somniferum HOM05D006136 ORTHO05D007244 1.1e-29 133.7 93 65.6
CARHR271930 Cardamine hirsuta HOM05D006136 ORTHO05D007244 1.4e-29 133.3 115 58.3
Thhalv10012942m.g Eutrema salsugineum HOM05D006136 ORTHO05D007244 2.4e-29 132.5 93 65.6
Cpa.g.sc46.113 Carica papaya HOM05D006136 ORTHO05D007244 4.2e-29 131.7 93 64.5
Carub.0008s1868 Capsella rubella HOM05D006136 ORTHO05D007244 5.4e-29 131.3 91 67.0
Cfa012873 Carpinus fangiana HOM05D006136 ORTHO05D007244 5.4e-29 131.3 93 65.6
THA.LOC104803376 Tarenaya hassleriana HOM05D006136 ORTHO05D007244 5.4e-29 131.3 119 53.8
Ciclev10007497m.g Citrus clementina HOM05D006136 ORTHO05D007244 7.1e-29 131.0 117 55.6
Dinv12632 Davidia involucrata HOM05D006136 ORTHO05D002774 9.3e-29 130.6 114 59.6
MD04G1000700 Malus domestica HOM05D006136 ORTHO05D007244 9.3e-29 130.6 93 65.6
PGR044G0474 Punica granatum HOM05D006136 ORTHO05D007244 9.3e-29 130.6 100 64.0
QL11p005727 Quercus lobata HOM05D006136 ORTHO05D007244 9.3e-29 130.6 100 63.0
Nitab4.5_0000807g0150 Nicotiana tabacum HOM05D006136 ORTHO05D007244 1.2e-28 130.2 102 58.8
RcHm_v2.0_Chr4g0384741 Rosa chinensis HOM05D006136 ORTHO05D007244 1.2e-28 130.2 120 55.0
Atru.chr7.1014 Acer truncatum HOM05D006136 ORTHO05D007244 1.6e-28 129.8 123 53.7
Aa31LG3G13960 Aethionema arabicum HOM05D006136 ORTHO05D007244 1.6e-28 129.8 136 53.7
AT5G58130 Arabidopsis thaliana HOM05D006136 ORTHO05D007244 2.7e-28 129.0 110 58.2
Sopen07g022390 Solanum pennellii HOM05D006136 ORTHO05D007244 2.7e-28 129.0 97 61.9
BcaB08g36165 Brassica carinata HOM05D006136 ORTHO05D007244 4.6e-28 128.3 93 64.5
BcaC04g19905 Brassica carinata HOM05D006136 ORTHO05D007244 4.6e-28 128.3 93 64.5
C09p50030 Brassica napus HOM05D006136 ORTHO05D007244 4.6e-28 128.3 93 64.5
BolC9t57856H Brassica oleracea HOM05D006136 ORTHO05D007244 4.6e-28 128.3 93 64.5
CSS0003139 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 4.6e-28 128.3 92 64.1
CSS0019621 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 4.6e-28 128.3 92 64.1
Cc06_g23510 Coffea canephora HOM05D006136 ORTHO05D007244 4.6e-28 128.3 99 60.6
FAN17G2087 Fragaria x ananassa HOM05D006136 ORTHO05D007244 4.6e-28 128.3 100 62.0
Peaxi162Scf00474g00018 Petunia axillaris HOM05D006136 ORTHO05D007244 4.6e-28 128.3 102 55.9
QL05p072260 Quercus lobata HOM05D000321 ORTHO05D007244 4.6e-28 128.3 94 63.8
Manes.02G224001 Manihot esculenta HOM05D006136 ORTHO05D007244 7.8e-28 127.5 105 60.0
Manes.11G052190 Manihot esculenta HOM05D006136 ORTHO05D007244 7.8e-28 127.5 93 64.5
AL8G34230 Arabidopsis lyrata HOM05D006136 ORTHO05D007244 1.0e-27 127.1 119 56.3
A10p16060 Brassica napus HOM05D006136 ORTHO05D007244 1.0e-27 127.1 93 63.4
BraA10t43623Z Brassica rapa HOM05D006136 ORTHO05D007244 1.0e-27 127.1 93 63.4
Eucgr.C02149 Eucalyptus grandis HOM05D006136 ORTHO05D007244 1.3e-27 126.7 96 58.3
FAN12G0507 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.7e-27 126.3 123 51.2
FAN12G3399 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.7e-27 126.3 123 51.2
Gohir.A08G016500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 1.7e-27 126.3 119 52.9
Gohir.D08G026500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 1.7e-27 126.3 117 53.8
Gorai.004G023000 Gossypium raimondii HOM05D006136 ORTHO05D007244 1.7e-27 126.3 117 53.8
CiPaw.07G237600 Carya illinoinensis HOM05D006136 ORTHO05D007244 2.3e-27 125.9 93 66.7
PGSC0003DMG400013541 Solanum tuberosum HOM05D006136 ORTHO05D007244 3.0e-27 125.6 97 60.8
CANSAT01G2594 Cannabis sativa HOM05D006136 ORTHO05D007244 3.9e-27 125.2 101 59.4
AUR62009114 Chenopodium quinoa HOM05D000163 ORTHO05D007244 3.9e-27 125.2 92 62.0
Oeu000955.1 Olea europaea HOM05D006136 ORTHO05D007244 3.9e-27 125.2 94 62.8
Zm00001eb209220 Zea mays HOM05D006136 ORTHO05D007244 3.9e-27 125.2 94 63.8
EL10Ac2g03821 Beta vulgaris HOM05D006136 ORTHO05D007244 5.1e-27 124.8 92 60.9
Duzib170G0744 Durio zibethinus HOM05D006136 ORTHO05D007244 5.1e-27 124.8 90 65.6
Ca_02520_v3 Cicer arietinum L. HOM05D006136 ORTHO05D007244 6.6e-27 124.4 91 62.6
COL.COLO4_09001 Corchorus olitorius HOM05D006136 ORTHO05D007244 1.1e-26 123.6 118 51.7
SEGI_05126 Sequoiadendron giganteum HOM05D006136 ORTHO05D007244 1.5e-26 123.2 113 51.3
AUR62039148 Chenopodium quinoa HOM05D006136 ORTHO05D007244 2.5e-26 122.5 115 51.3
MELO3C010014.2 Cucumis melo HOM05D006136 ORTHO05D007244 2.5e-26 122.5 101 59.4
Actinidia33603 Actinidia chinensis HOM05D006136 ORTHO05D007244 3.3e-26 122.1 92 60.9
MSTRG.26507 Avicennia marina HOM05D006136 ORTHO05D007244 3.3e-26 122.1 98 58.2
Thecc.09G202200 Theobroma cacao HOM05D006136 ORTHO05D007244 7.3e-26 120.9 108 54.6
ATR0626G098 Amborella trichopoda HOM05D006136 ORTHO05D007244 9.6e-26 120.6 118 54.2
ClCG03G011600 Citrullus lanatus HOM05D006136 ORTHO05D007244 9.6e-26 120.6 101 58.4
CsaV3_1G044190 Cucumis sativus L. HOM05D006136 ORTHO05D007244 9.6e-26 120.6 101 58.4
Os02g0138200 Oryza sativa ssp. japonica HOM05D006136 ORTHO05D007244 9.6e-26 120.6 110 53.6
HPP92_017041 Vanilla planifolia HOM05D006136 ORTHO05D007244 1.6e-25 119.8 107 54.2
Migut.L01610 Erythranthe guttata HOM05D006136 ORTHO05D007244 2.8e-25 119.0 100 57.0
Sabra18G0127000 Salix brachista HOM05D006136 ORTHO05D007244 3.6e-25 118.6 117 51.3
Potri.018G151300 Populus trichocarpa HOM05D006136 ORTHO05D007244 1.1e-24 117.1 131 50.4
Rhsim08G0117200 Rhododendron simsii HOM05D006136 ORTHO05D007244 1.8e-24 116.3 114 50.9
DCAR_020445 Daucus carota HOM05D006136 ORTHO05D002774 3.1e-24 115.5 142 43.7
SalBow5G5580 Salvia bowleyana HOM05D006136 ORTHO05D007244 6.9e-24 114.4 95 57.9
SGA_v2.0_scaffold21G09584 Striga asiatica HOM05D006136 ORTHO05D007244 9.0e-24 114.0 95 55.8
Nn5g26953 Nelumbo nucifera HOM05D006136 ORTHO05D007244 1.3e-22 110.2 79 63.3
Lj9A583T57 Lonicera japonica HOM05D006136 ORTHO05D007244 4.9e-22 108.2 123 47.2
TAR626G0660 Trochodendron aralioides HOM05D006136 ORTHO05D007244 8.4e-22 107.5 91 58.2
unitig_699.g19255 Utricularia gibba HOM05D006136 ORTHO05D007244 3.2e-21 105.5 130 42.3
VMungo1309G0146 Vigna mungo HOM05D006136 ORTHO05D007244 7.1e-21 104.4 129 44.2
MBI16_g40727_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 1.6e-20 103.2 115 53.0
FAN22G1396 Fragaria x ananassa HOM05D006136 ORTHO05D007244 2.1e-20 102.8 100 54.0
SMO367G1245 Selaginella moellendorffii HOM05D006136 ORTHO05D007244 3.0e-19 99.0 89 53.9
vmacro17832 Vaccinium macrocarpon HOM05D006136 ORTHO05D007244 1.9e-18 96.3 123 43.9
PGR044G0304 Punica granatum HOM05D006136 ORTHO05D007244 4.3e-18 95.1 96 53.1
Nitab4.5_0000170g0140 Nicotiana tabacum HOM05D006136 ORTHO05D007244 9.0e-16 87.4 130 41.5
Pp3c1_8430 Physcomitrium patens HOM05D006136 ORTHO05D007244 3.4e-15 85.5 100 43.0
Mapoly0169s0023 Marchantia polymorpha HOM05D006136 ORTHO05D007244 1.3e-14 83.6 96 41.7
AagrBONN_evm.TU.Sc2ySwM_228.2439 Anthoceros agrestis HOM05D006136 ORTHO05D007244 1.7e-14 83.2 125 32.8
TPR.G20669 Trifolium pratense HOM05D006136 ORTHO05D007244 4.9e-14 81.6 78 56.4
BcaC03g14120 Brassica carinata HOM05D009052 ORTHO05D011796 3.9e-11 72.0 76 51.3
Hma1.2p1_2895F.1_g329976 Hydrangea macrophylla HOM05D006136 ORTHO05D007244 5.1e-11 71.6 61 55.7
C02p13590 Brassica napus HOM05D006136 ORTHO05D007244 3.3e-10 68.9 76 50.0
BolC2t07471H Brassica oleracea HOM05D006136 ORTHO05D007244 3.3e-10 68.9 76 50.0
CDE05G3219 Ceratophyllum demersum HOM05D006136 ORTHO05D007244 4.3e-10 68.6 52 57.7
TPR.G18712 Trifolium pratense HOM05D006136 ORTHO05D007244 7.4e-10 67.8 48 62.5
CBR_g39420 Chara braunii HOM05D006136 ORTHO05D007244 9.0e-08 60.8 56 48.2
Cre14.g633400 Chlamydomonas reinhardtii HOM05D006136 ORTHO05D007244 1.7e-06 56.6 123 31.7


User provided reference genes

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