Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 5.8e-176 621.3 455 100.0
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 1.8e-161 573.2 455 94.7
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 6.9e-161 571.2 455 91.4
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 7.5e-123 444.9 494 61.7
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 4.4e-115 419.1 455 72.7
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.3e-114 417.5 455 69.9
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 3.1e-113 412.9 453 72.0
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 1.9e-110 403.7 452 61.1
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 7.5e-107 391.7 455 70.1
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 1.9e-105 387.1 452 67.7
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 5.4e-105 385.6 455 57.4
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 1.2e-104 384.4 454 67.0
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 5.2e-100 369.0 455 66.6
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 5.8e-99 365.5 455 54.1
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 2.2e-98 363.6 454 67.6
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 4.9e-98 362.5 455 67.0
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 3.2e-97 359.8 487 64.9
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.2e-97 359.8 463 54.0
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 1.2e-96 357.8 455 66.6
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 6.0e-96 355.5 456 63.8
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 3.0e-95 353.2 455 66.2
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 6.6e-95 352.1 455 65.3
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 3.3e-94 349.7 455 66.2
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 2.1e-93 347.1 455 66.6
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 2.8e-93 346.7 455 58.7
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 1.8e-92 344.0 453 60.5
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 2.3e-92 343.6 447 62.0
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 5.2e-92 342.4 451 50.1
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 1.9e-89 334.0 455 48.6
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 1.9e-89 334.0 455 48.8
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 5.4e-89 332.4 455 48.6
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 1.6e-88 330.9 452 45.6
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 2.1e-88 330.5 455 64.6
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 2.7e-88 330.1 458 62.4
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 6.0e-88 328.9 454 53.1
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 1.0e-87 328.2 455 58.5
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 5.1e-87 325.9 412 66.5
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 1.1e-86 324.7 414 59.2
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 1.5e-86 324.3 470 50.2
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 4.3e-86 322.8 452 63.3
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 4.3e-86 322.8 455 62.0
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 9.5e-86 321.6 439 63.1
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 9.5e-86 321.6 455 47.9
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 2.8e-85 320.1 452 63.1
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 4.7e-85 319.3 455 61.5
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 6.2e-85 318.9 468 50.9
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 6.2e-85 318.9 452 63.5
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 3.1e-84 316.6 454 50.2
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 3.4e-83 313.2 452 61.3
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 4.4e-83 312.8 455 56.3
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.3e-82 311.2 455 56.0
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 1.7e-82 310.8 455 63.1
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 3.8e-82 309.7 455 51.4
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 4.9e-82 309.3 521 45.5
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 1.1e-81 308.1 440 49.1
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 1.2e-80 304.7 455 46.6
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 3.5e-80 303.1 455 60.7
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 7.8e-80 302.0 455 60.0
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 7.8e-80 302.0 455 48.8
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 3.0e-79 300.1 425 59.5
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 3.3e-78 296.6 432 61.8
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 3.6e-77 293.1 455 60.2
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 1.4e-76 291.2 455 58.2
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 3.1e-76 290.0 452 61.1
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 4.0e-76 289.7 455 49.9
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 1.2e-75 288.1 452 60.2
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 2.0e-75 287.3 455 49.9
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 5.8e-75 285.8 452 61.3
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 5.8e-75 285.8 452 60.4
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 5.8e-75 285.8 452 60.4
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 7.6e-75 285.4 495 52.5
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.3e-74 284.6 454 59.3
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 6.4e-74 282.3 452 61.1
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 6.4e-74 282.3 455 59.6
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 2.4e-73 280.4 452 59.3
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 5.4e-73 279.3 449 60.4
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 5.4e-73 279.3 449 60.4
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 7.1e-73 278.9 455 46.6
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 9.3e-73 278.5 452 57.3
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 1.2e-72 278.1 446 61.9
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 1.0e-71 275.0 465 44.3
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 5.6e-70 269.2 455 55.8
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 3.4e-67 260.0 455 56.7
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 7.6e-67 258.8 308 60.7
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 8.4e-66 255.4 450 47.8
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 2.4e-65 253.8 455 53.0
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 7.1e-65 252.3 455 57.6
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 9.3e-65 251.9 423 37.1
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 1.6e-64 251.1 455 45.9
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 2.1e-64 250.8 284 63.0
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 5.1e-63 246.1 455 46.6
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 6.7e-63 245.7 474 47.5
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 1.1e-62 245.0 308 55.5
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 6.9e-60 235.7 425 52.5
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 1.5e-59 234.6 405 48.4
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 7.6e-59 232.3 449 44.3
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.3e-58 231.5 442 34.6
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 3.8e-58 229.9 308 57.8
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.4e-57 228.0 493 33.1
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 1.9e-57 227.6 452 44.7
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.9e-55 219.9 452 43.6
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 8.7e-55 218.8 248 48.0
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 1.5e-54 218.0 383 47.0
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 7.2e-41 172.6 211 47.9
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 3.6e-40 170.2 228 61.0
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 4.6e-40 169.9 113 74.3
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 1.1e-36 158.7 202 59.9
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 2.0e-35 154.5 308 43.2
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 1.8e-28 131.3 447 28.9
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 3.1e-28 130.6 306 30.1
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 6.5e-26 122.9 96 59.4
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.8e-23 114.8 112 47.3
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 2.0e-22 111.3 86 66.3
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 1.1e-20 105.5 131 42.0
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.1e-20 105.5 306 26.1
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 3.1e-20 104.0 417 26.4
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 2.6e-19 100.9 85 56.5
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 3.8e-18 97.1 84 58.3
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 6.8e-15 86.3 93 43.0
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 1.5e-14 85.1 72 62.5
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.7e-13 81.6 60 61.7
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.1e-12 79.0 301 31.9
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 1.1e-12 79.0 53 73.6
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 4.5e-11 73.6 115 40.9
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 5.5e-09 66.6 52 57.7
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 1.2e-08 65.5 116 32.8
arahy.Tifrunner.gnm1.ann1.WCQ4SR Arachis hypogaea HOM05D005557 ORTHO05D006748 6.1e-08 63.2 54 63.0
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 6.1e-08 63.2 116 32.8
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.5e-06 58.5 41 61.0
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 2.6e-06 57.8 116 27.6
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 9.8e-06 55.8 86 40.7


User provided reference genes

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