Gene: Sopen03g022800
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g022800
- Transcript Identifier Sopen03g022800.1
- Gene Type Coding gene
- Location Spenn-ch03 : 54296479-54301892 : positive
Gene Family Information
- ID HOM05D005626
- #Genes/#Species 137/91
- Phylogenetic origin
- ID ORTHO05D007372
- #Genes/#Species 131/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen03g022800.1
Descriptions
- Description Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: binding | LOCATED IN: chloroplast | EXPRESSED IN: 12 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Tetratricopeptide repeat-containing , Tetratricopeptide repeat
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G53080 |
| GO:0031425 | ISO | PLAZA Integrative Orthology | chloroplast RNA processing | AT5G53080 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G53080 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.3.3.5 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing co-factor (WTG1) |