Gene: Aa31LG3G9390
General Information
Structural Information
- Species Aethionema arabicum
- Gene Identifier Aa31LG3G9390
- Transcript Identifier Aa31LG3G9390.mRNA1
- Gene Type Coding gene
- Location LG-3 : 8140384-8149282 : negative
Gene Family Information
- ID HOM05D005626
- #Genes/#Species 137/91
- Phylogenetic origin
- ID ORTHO05D007372
- #Genes/#Species 131/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Aa31LG3G9390.mRNA1
- Alias Aa31LG3G9390
- Alias Aa31LG3G9390-mRNA-1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G53080 |
| GO:0031425 | ISO | PLAZA Integrative Orthology | chloroplast RNA processing | AT5G53080 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016791 | IEA | InterPro | phosphatase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G53080 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR020070 | Ribosomal protein L9, N-terminal |
| IPR036791 | Ribosomal protein L9, C-terminal domain superfamily |
| IPR036935 | Ribosomal protein L9, N-terminal domain superfamily |
| IPR036457 | PPM-type phosphatase domain superfamily |
| IPR001932 | PPM-type phosphatase domain |
| IPR019734 | Tetratricopeptide repeat |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR009027 | Ribosomal protein L9/RNase H1, N-terminal |
| Mapman id | Description |
|---|---|
| 16.11.3.3.5 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing co-factor (WTG1) |
| 17.7.1.1.9 | Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL9 |
| 18.4.25.2.6 | Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade F phosphatase |