Gene: COL.COLO4_16792
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_16792
- Transcript Identifier COL.rna15556
- Gene Type Coding gene
- Location AWUE01016254.1 : 28547-37164 : positive
Gene Family Information
- ID HOM05D005626
- #Genes/#Species 137/91
- Phylogenetic origin
- ID ORTHO05D007032
- #Genes/#Species 135/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna15556
- GenBank OMO93594.1
- id gene16764
- gene_name COLO4_16792
- uniprot A0A1R3JFJ2
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043086 | IEA | GOA Database | negative regulation of catalytic activity | |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT5G53080 |
| GO:0031425 | ISO | PLAZA Integrative Orthology | chloroplast RNA processing | AT5G53080 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004857 | IEA | GOA Database | enzyme inhibitor activity | |
| GO:0004857 | IEA | InterPro | enzyme inhibitor activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G53080 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR036612 | K Homology domain, type 1 superfamily |
| IPR019734 | Tetratricopeptide repeat |
| IPR004087 | K Homology domain |
| IPR004088 | K Homology domain, type 1 |
| IPR006501 | Pectinesterase inhibitor domain |
| IPR035513 | Invertase/pectin methylesterase inhibitor domain superfamily |
| Mapman id | Description |
|---|---|
| 16.11.3.3.5 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing co-factor (WTG1) |