Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 1.7e-41 172.2 81 100.0
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 8.6e-38 159.8 79 94.9
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 3.5e-31 137.9 68 89.7
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 3.5e-31 137.9 68 89.7
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 1.3e-30 136.0 68 88.2
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 3.8e-30 134.4 68 83.8
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 4.3e-29 131.0 68 82.4
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 5.6e-29 130.6 68 82.4
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 1.6e-28 129.0 68 80.9
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 2.8e-28 128.3 68 79.4
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 2.8e-28 128.3 68 79.4
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 3.6e-28 127.9 67 82.1
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 3.6e-28 127.9 68 79.4
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 1.0e-27 126.3 68 76.5
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 1.0e-27 126.3 68 79.4
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 1.0e-27 126.3 68 77.9
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 1.0e-27 126.3 68 79.4
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 1.4e-27 125.9 68 77.9
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 1.8e-27 125.6 68 77.9
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 1.8e-27 125.6 68 77.9
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 4.0e-27 124.4 68 77.9
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 4.0e-27 124.4 68 79.4
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 4.0e-27 124.4 68 79.4
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 5.2e-27 124.0 68 76.5
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 5.2e-27 124.0 68 76.5
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 6.8e-27 123.6 68 75.0
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 6.8e-27 123.6 68 75.0
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 6.8e-27 123.6 68 75.0
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 8.9e-27 123.2 68 75.0
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 1.2e-26 122.9 68 73.5
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 1.5e-26 122.5 68 72.1
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 2.0e-26 122.1 68 75.0
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.6e-26 121.7 68 73.5
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 4.4e-26 120.9 68 75.0
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 4.4e-26 120.9 68 75.0
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 4.4e-26 120.9 68 75.0
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 4.4e-26 120.9 68 75.0
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 5.7e-26 120.6 68 73.5
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 5.7e-26 120.6 68 73.5
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 5.7e-26 120.6 68 75.0
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 7.5e-26 120.2 68 73.5
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 9.8e-26 119.8 68 72.1
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 1.3e-25 119.4 66 75.8
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 2.9e-25 118.2 68 70.6
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 3.7e-25 117.9 66 72.7
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 3.7e-25 117.9 68 72.1
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 8.3e-25 116.7 68 70.6
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 8.3e-25 116.7 67 73.1
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 8.3e-25 116.7 68 70.6
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 1.1e-24 116.3 68 72.1
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 1.1e-24 116.3 68 69.1
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 1.1e-24 116.3 68 70.6
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 1.8e-24 115.5 68 69.1
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.8e-24 115.5 68 70.6
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.8e-24 115.5 68 70.6
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 2.4e-24 115.2 68 72.1
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 3.2e-24 114.8 68 70.6
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 3.2e-24 114.8 68 69.1
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 3.2e-24 114.8 68 70.6
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 4.1e-24 114.4 68 67.6
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 5.4e-24 114.0 68 70.6
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 5.4e-24 114.0 68 69.1
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 7.0e-24 113.6 68 69.1
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 9.2e-24 113.2 68 69.1
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 9.2e-24 113.2 68 67.6
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 9.2e-24 113.2 68 69.1
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 1.6e-23 112.5 67 71.6
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 2.0e-23 112.1 68 69.1
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 2.0e-23 112.1 68 69.1
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 2.7e-23 111.7 68 66.2
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 3.5e-23 111.3 68 64.7
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 5.9e-23 110.5 68 67.6
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 7.8e-23 110.2 68 66.2
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 1.0e-22 109.8 66 71.2
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 1.0e-22 109.8 68 66.2
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 1.3e-22 109.4 68 66.2
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 1.3e-22 109.4 68 66.2
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 1.7e-22 109.0 68 70.6
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 1.7e-22 109.0 68 64.7
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 1.7e-22 109.0 68 64.7
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 1.7e-22 109.0 68 66.2
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 3.0e-22 108.2 68 66.2
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 3.0e-22 108.2 68 66.2
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 3.9e-22 107.8 68 61.8
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 5.0e-22 107.5 65 67.7
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 3.3e-21 104.8 68 63.2
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 4.3e-21 104.4 68 63.2
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 7.3e-21 103.6 68 63.2
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.2e-20 102.8 68 63.2
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 8.0e-20 100.1 68 60.3
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 2.3e-19 98.6 57 73.7
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 2.3e-19 98.6 68 58.8
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 3.4e-18 94.7 57 68.4
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 7.5e-18 93.6 68 60.3
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 2.2e-17 92.0 75 57.3
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 1.4e-16 89.4 52 69.2
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 3.0e-14 81.6 62 58.1
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 5.0e-14 80.9 65 55.4
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.5e-13 78.6 68 54.4
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 2.5e-13 78.6 68 55.9
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 4.7e-12 74.3 68 54.4
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 2.2e-09 65.5 38 65.8
Glyma.02G198601 Glycine max HOM05D006688 ORTHO05D008550 3.2e-08 61.6 33 84.8
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 2.3e-06 55.5 34 64.7


User provided reference genes

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