Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 0.0e+00 1097.8 536 100.0
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 1.1e-309 1065.8 558 94.3
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 1.7e-259 899.0 537 81.6
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 2.5e-255 885.2 541 80.2
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 2.2e-254 882.1 548 79.6
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 8.2e-254 880.2 540 78.3
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 2.6e-252 875.2 537 79.9
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 5.9e-252 874.0 541 76.5
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 7.7e-252 873.6 542 77.9
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 1.4e-250 869.4 537 79.1
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 1.2e-249 866.3 540 77.8
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 2.7e-249 865.1 537 79.5
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 4.7e-249 864.4 499 80.6
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.0e-248 863.2 541 77.3
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 2.3e-248 862.1 537 79.1
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 3.9e-248 861.3 542 77.3
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 5.7e-247 857.4 537 76.7
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.7e-246 855.9 548 76.1
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 6.3e-246 854.0 542 76.4
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 2.4e-245 852.0 537 76.5
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 3.1e-245 851.7 542 75.1
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 7.0e-245 850.5 537 76.4
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 3.5e-244 848.2 537 76.2
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 4.5e-244 847.8 522 77.8
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 5.9e-244 847.4 541 75.4
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 7.7e-244 847.0 541 76.2
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.3e-243 846.3 515 77.9
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 1.7e-243 845.9 541 77.1
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 8.5e-243 843.6 538 76.6
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 1.1e-242 843.2 537 75.6
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.9e-242 842.4 547 74.8
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 3.2e-242 841.6 539 76.3
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 4.2e-242 841.3 542 75.5
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 4.2e-242 841.3 515 77.7
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 4.2e-242 841.3 538 76.4
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 4.2e-242 841.3 540 75.7
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 2.7e-241 838.6 529 77.1
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 4.7e-241 837.8 542 75.1
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.0e-240 836.6 550 75.6
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 3.0e-240 835.1 515 76.9
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 4.0e-240 834.7 568 72.0
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 4.0e-240 834.7 541 74.7
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 5.2e-240 834.3 515 77.3
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.8e-240 833.6 563 73.5
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 1.1e-239 833.2 537 74.7
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 1.1e-239 833.2 530 76.6
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 4.4e-239 831.2 515 77.1
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.7e-238 829.3 542 74.4
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 1.7e-238 829.3 515 76.9
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 2.8e-238 828.6 542 74.0
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.7e-238 828.2 576 72.4
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 4.8e-238 827.8 541 74.5
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 6.3e-238 827.4 547 75.1
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 4.1e-237 824.7 541 74.5
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 9.1e-237 823.5 539 73.3
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 9.1e-237 823.5 594 69.5
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 3.5e-236 821.6 553 73.4
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 5.9e-236 820.8 537 74.3
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 2.9e-235 818.5 541 73.8
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 5.0e-235 817.8 544 73.7
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 6.5e-235 817.4 518 75.3
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 6.5e-235 817.4 516 76.7
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 8.5e-235 817.0 523 76.1
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 1.5e-234 816.2 535 73.5
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 1.9e-234 815.8 538 73.0
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 3.2e-234 815.1 535 73.5
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 3.2e-234 815.1 529 75.0
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 3.2e-234 815.1 516 75.0
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 4.2e-234 814.7 539 73.3
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 5.5e-234 814.3 543 73.3
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 5.5e-234 814.3 540 74.1
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 7.2e-234 813.9 544 73.2
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 9.4e-234 813.5 529 74.9
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.2e-233 813.1 515 75.9
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 1.6e-233 812.8 512 75.4
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 3.6e-233 811.6 538 73.2
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 3.6e-233 811.6 514 76.3
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 4.7e-233 811.2 544 73.2
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 4.7e-233 811.2 592 68.2
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 4.0e-232 808.1 536 73.1
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 5.2e-232 807.7 540 72.8
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 2.6e-231 805.4 537 73.7
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 3.4e-231 805.1 540 72.6
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 3.7e-230 801.6 562 71.0
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 7.0e-229 797.3 540 72.2
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 5.9e-228 794.3 540 72.2
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.0e-227 793.5 540 72.0
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 1.0e-227 793.5 521 72.9
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 1.3e-227 793.1 539 72.4
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 1.3e-227 793.1 539 72.4
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 3.8e-227 791.6 540 73.0
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 5.0e-227 791.2 540 72.8
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 1.5e-226 789.6 535 72.1
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 5.5e-226 787.7 544 72.1
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 3.0e-224 781.9 528 73.3
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 2.6e-223 778.9 539 70.3
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 5.7e-223 777.7 540 69.4
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 7.5e-223 777.3 544 70.2
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 9.8e-223 776.9 469 78.0
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.1e-221 773.5 489 75.3
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 3.1e-221 771.9 540 68.9
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.8e-216 756.1 529 69.6
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.4e-213 746.5 521 70.4
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 3.0e-211 738.8 536 67.9
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 1.4e-208 729.9 530 68.3
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 2.0e-207 726.1 471 72.6
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 4.6e-196 688.3 461 71.8
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 5.6e-194 681.4 426 74.6
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 8.1e-193 677.6 398 78.1
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 4.6e-188 661.8 433 73.9
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 5.1e-187 658.3 400 76.2
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 2.7e-172 609.4 491 62.7
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 7.9e-172 607.8 411 74.9
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 3.5e-164 582.4 332 79.8
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 2.2e-150 536.6 451 56.5
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 1.4e-149 533.9 502 54.0
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 4.2e-141 505.8 409 62.8
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.8e-139 500.4 403 64.5
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 2.2e-137 493.4 283 79.2
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 6.3e-129 465.3 466 52.4
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 6.3e-129 465.3 453 51.9
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 1.9e-125 453.8 394 58.9
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 6.1e-124 448.7 346 63.0
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 1.8e-120 437.2 322 67.4
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 5.6e-101 372.5 272 70.2
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.3e-86 323.9 236 72.9
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 2.8e-84 317.0 181 79.6
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 4.1e-80 303.1 182 77.5
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 5.4e-72 276.2 171 74.9
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 7.9e-55 219.2 134 73.1
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.1e-43 182.2 115 73.9
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 6.7e-38 162.9 102 72.5
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 3.9e-30 137.1 81 76.5
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 1.1e-21 109.0 68 73.5
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 8.2e-20 102.8 53 84.9
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 5.0e-17 93.6 50 80.0
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 1.2e-15 89.0 67 61.2
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 1.2e-15 89.0 67 61.2
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 2.1e-15 88.2 57 70.2
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 4.5e-10 70.5 78 47.4


User provided reference genes

Program Settings