Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 3.6e-149 531.6 272 100.0
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 5.0e-58 228.8 235 63.8
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 9.2e-36 154.8 113 82.3
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 2.3e-34 150.2 114 80.7
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea HOM05D003850 ORTHO05D004515 1.1e-28 131.3 97 79.4
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.0e-26 124.8 113 73.5
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 1.9e-25 120.6 80 86.2
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.9e-25 120.6 80 86.2
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 5.6e-25 119.0 113 68.1
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 5.6e-25 119.0 113 70.8
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 3.6e-24 116.3 104 72.1
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 1.4e-23 114.4 113 64.6
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 2.4e-23 113.6 113 66.4
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 5.3e-23 112.5 112 67.0
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.3e-21 107.8 113 62.8
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 1.7e-21 107.5 89 74.2
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 9.3e-20 101.7 113 59.3
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 1.6e-19 100.9 81 79.0
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 4.6e-19 99.4 113 61.1
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 7.9e-19 98.6 113 60.2
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 3.0e-18 96.7 104 57.7
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 1.5e-17 94.4 89 68.5
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 1.9e-17 94.0 113 58.4
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 2.5e-17 93.6 113 58.4
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 7.4e-17 92.0 108 54.6
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 9.6e-17 91.7 99 57.6
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 1.3e-16 91.3 113 56.6
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.3e-16 91.3 113 56.6
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 4.8e-16 89.4 113 58.4
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 6.2e-16 89.0 92 59.8
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 6.2e-16 89.0 113 57.5
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 8.1e-16 88.6 104 58.7
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 8.1e-16 88.6 104 57.7
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 8.1e-16 88.6 98 57.1
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 1.1e-15 88.2 112 56.2
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 1.1e-15 88.2 112 56.2
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 1.1e-15 88.2 95 56.8
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 1.4e-15 87.8 95 55.8
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 1.8e-15 87.4 95 55.8
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 3.1e-15 86.7 144 48.6
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 3.1e-15 86.7 112 54.5
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 3.1e-15 86.7 112 54.5
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 4.0e-15 86.3 103 57.3
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 5.3e-15 85.9 113 54.0
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 6.9e-15 85.5 113 53.1
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 9.0e-15 85.1 111 52.3
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 1.5e-14 84.3 99 57.6
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 2.0e-14 84.0 113 52.2
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 2.6e-14 83.6 113 52.2
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 5.8e-14 82.4 75 64.0
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 7.6e-14 82.0 111 52.3
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 7.6e-14 82.0 89 59.6
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 7.6e-14 82.0 85 61.2
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 9.9e-14 81.6 113 51.3
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 1.3e-13 81.3 108 51.9
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.7e-13 80.9 85 57.6
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 2.2e-13 80.5 108 51.9
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.2e-13 80.5 102 53.9
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 2.2e-13 80.5 115 50.4
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 2.2e-13 80.5 114 52.6
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 2.2e-13 80.5 114 47.4
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.2e-13 80.5 97 51.5
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 2.2e-13 80.5 117 47.9
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 2.2e-13 80.5 121 47.9
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 3.8e-13 79.7 82 56.1
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 3.8e-13 79.7 85 58.8
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 4.9e-13 79.3 115 49.6
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 4.9e-13 79.3 72 65.3
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 4.9e-13 79.3 72 65.3
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 6.4e-13 79.0 115 50.4
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 6.4e-13 79.0 97 50.5
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 6.4e-13 79.0 110 53.6
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 8.4e-13 78.6 101 57.4
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 8.4e-13 78.6 112 50.9
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 8.4e-13 78.6 107 47.7
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 8.4e-13 78.6 110 50.9
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 8.4e-13 78.6 70 65.7
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 1.1e-12 78.2 72 63.9
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 1.1e-12 78.2 103 51.5
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.4e-12 77.8 69 68.1
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 1.4e-12 77.8 76 60.5
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 1.9e-12 77.4 100 50.0
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 2.4e-12 77.0 100 57.0
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 2.4e-12 77.0 114 48.2
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 3.2e-12 76.6 106 54.7
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 3.2e-12 76.6 70 64.3
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 3.2e-12 76.6 86 58.1
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 3.2e-12 76.6 105 49.5
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 4.2e-12 76.3 73 58.9
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 4.2e-12 76.3 73 58.9
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 5.5e-12 75.9 109 48.6
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 5.5e-12 75.9 126 46.8
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 5.5e-12 75.9 77 57.1
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 9.3e-12 75.1 105 50.5
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 9.3e-12 75.1 73 57.5
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 9.3e-12 75.1 73 57.5
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 9.3e-12 75.1 73 57.5
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 9.3e-12 75.1 73 57.5
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 9.3e-12 75.1 113 49.6
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 1.2e-11 74.7 104 51.9
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 1.2e-11 74.7 120 47.5
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 1.6e-11 74.3 100 51.0
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.6e-11 74.3 89 50.6
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 2.7e-11 73.6 124 47.6
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 3.5e-11 73.2 108 51.9
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 4.6e-11 72.8 114 45.6
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 7.9e-11 72.0 102 49.0
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 7.9e-11 72.0 84 54.8
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 1.0e-10 71.6 74 56.8
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 1.3e-10 71.2 115 47.0
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 1.8e-10 70.9 102 48.0
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 2.3e-10 70.5 104 50.0
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 3.0e-10 70.1 62 62.9
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 3.0e-10 70.1 62 62.9
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 3.0e-10 70.1 112 46.4
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 3.9e-10 69.7 72 52.8
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 3.9e-10 69.7 75 57.3
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 8.7e-10 68.6 78 59.0
Medtr2g025620 Medicago truncatula HOM05D003850 ORTHO05D004515 3.3e-09 66.6 78 52.6
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 3.3e-09 66.6 94 48.9
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 4.3e-09 66.2 114 44.7
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 4.3e-09 66.2 107 43.0
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 5.6e-09 65.9 114 45.6
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 1.6e-08 64.3 121 44.6
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 2.8e-08 63.5 113 43.4
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 3.7e-08 63.2 113 43.4
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 3.7e-08 63.2 113 43.4
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 4.8e-08 62.8 105 41.0
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.8e-07 60.8 116 40.5
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 9.0e-07 58.5 113 45.1
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 1.2e-06 58.2 77 57.1
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 7.6e-06 55.5 127 36.2
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 7.6e-06 55.5 70 47.1


User provided reference genes

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