Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.3VV2Z3 Arachis hypogaea HOM05D005043 ORTHO05D006182 1.3e-131 473.0 228 100.0
arahy.Tifrunner.gnm1.ann1.5IY6XE Arachis hypogaea HOM05D005043 ORTHO05D006182 4.8e-102 374.8 210 88.1
Glyma.06G229100 Glycine max HOM05D005043 ORTHO05D006182 3.4e-92 342.0 208 79.8
TPR.G12585 Trifolium pratense HOM05D005043 ORTHO05D006182 1.3e-91 340.1 204 80.4
Medtr6g466500 Medicago truncatula HOM05D005043 ORTHO05D006182 2.9e-91 339.0 216 76.4
Lalb_Chr19g0133801 Lupinus albus HOM05D005043 ORTHO05D006182 6.4e-91 337.8 213 77.0
arahy.Tifrunner.gnm1.ann1.NUK3H0 Arachis hypogaea HOM05D005043 ORTHO05D006182 1.1e-90 337.0 223 75.8
Duzib213G0837 Durio zibethinus HOM05D005043 ORTHO05D006182 1.9e-90 336.3 214 75.7
Lalb_Chr03g0031161 Lupinus albus HOM05D005043 ORTHO05D006182 2.5e-90 335.9 216 75.5
Glyma.12G157700 Glycine max HOM05D005043 ORTHO05D006182 5.5e-90 334.7 208 78.4
Ca_26224_v3 Cicer arietinum L. HOM05D005043 ORTHO05D006182 7.1e-90 334.3 204 77.9
GSVIVG01014196001 Vitis vinifera HOM05D005043 ORTHO05D006182 7.1e-90 334.3 205 78.0
CANSAT35G1445 Cannabis sativa HOM05D005043 ORTHO05D006182 1.6e-89 333.2 205 79.0
arahy.Tifrunner.gnm1.ann1.5E18AM Arachis hypogaea HOM05D005043 ORTHO05D006182 2.1e-89 332.8 229 73.4
Thecc.07G117100 Theobroma cacao HOM05D005043 ORTHO05D006182 2.1e-89 332.8 208 76.9
COL.COLO4_17542 Corchorus olitorius HOM05D005043 ORTHO05D006182 3.5e-89 332.0 208 77.4
Phvul.011G162300 Phaseolus vulgaris HOM05D005043 ORTHO05D006182 4.6e-89 331.6 204 79.4
Prupe.4G164600 Prunus persica HOM05D005043 ORTHO05D006182 1.8e-88 329.7 205 77.1
Nn7g37328 Nelumbo nucifera HOM05D005043 ORTHO05D006182 5.1e-88 328.2 202 77.7
FAN21G3659 Fragaria x ananassa HOM05D005043 ORTHO05D006182 1.1e-87 327.0 205 76.1
MD11G1263900 Malus domestica HOM05D005043 ORTHO05D006182 1.5e-87 326.6 205 76.1
vmacro11941 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 1.5e-87 326.6 203 75.4
vmacro23467 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 1.5e-87 326.6 203 75.4
FvH4_3g18270 Fragaria vesca HOM05D005043 ORTHO05D006182 4.3e-87 325.1 205 75.6
CsaV3_4G033100 Cucumis sativus L. HOM05D005043 ORTHO05D006182 5.7e-87 324.7 212 72.6
AL3G27210 Arabidopsis lyrata HOM05D005043 ORTHO05D006182 7.4e-87 324.3 213 73.7
FAN11G3478 Fragaria x ananassa HOM05D005043 ORTHO05D006182 7.4e-87 324.3 205 75.1
FAN25G1853 Fragaria x ananassa HOM05D005043 ORTHO05D006182 9.6e-87 323.9 205 75.6
FAN16G3394 Fragaria x ananassa HOM05D005043 ORTHO05D006182 2.1e-86 322.8 205 74.6
Hma1.2p1_0290F.1_g114850 Hydrangea macrophylla HOM05D005043 ORTHO05D006182 2.1e-86 322.8 211 72.0
RcHm_v2.0_Chr5g0030901 Rosa chinensis HOM05D005043 ORTHO05D006182 2.1e-86 322.8 208 73.6
Cpa.g.sc77.9 Carica papaya HOM05D005043 ORTHO05D006182 6.2e-86 321.2 205 73.7
Gohir.A01G054300 Gossypium hirsutum HOM05D005043 ORTHO05D006182 6.2e-86 321.2 205 73.7
Gohir.D01G042722 Gossypium hirsutum HOM05D005043 ORTHO05D006182 8.2e-86 320.9 205 73.7
Gorai.002G054600 Gossypium raimondii HOM05D005043 ORTHO05D006182 8.2e-86 320.9 205 73.7
Dinv18365 Davidia involucrata HOM05D005043 ORTHO05D006182 1.1e-85 320.5 206 74.3
ClCG11G017440 Citrullus lanatus HOM05D005043 ORTHO05D006182 1.4e-85 320.1 212 70.8
Ciclev10023741m.g Citrus clementina HOM05D005043 ORTHO05D006182 1.4e-85 320.1 206 74.3
HanXRQChr13g0390281 Helianthus annuus HOM05D005043 ORTHO05D006182 1.4e-85 320.1 205 75.6
TAR636G1993 Trochodendron aralioides HOM05D005043 ORTHO05D006182 1.4e-85 320.1 202 74.8
CDE09G1444 Ceratophyllum demersum HOM05D005043 ORTHO05D006182 1.8e-85 319.7 202 76.2
Carub.0003s1455 Capsella rubella HOM05D005043 ORTHO05D006182 3.1e-85 318.9 205 74.1
HanXRQChr12g0362951 Helianthus annuus HOM05D005043 ORTHO05D006182 3.1e-85 318.9 206 74.8
PGR083G1657 Punica granatum HOM05D005043 ORTHO05D006182 4.0e-85 318.5 205 73.2
Rhsim06G0208200 Rhododendron simsii HOM05D005043 ORTHO05D006182 4.0e-85 318.5 205 74.1
AT3G14890 Arabidopsis thaliana HOM05D005043 ORTHO05D006182 5.3e-85 318.2 213 72.3
CiPaw.11G160200 Carya illinoinensis HOM05D005043 ORTHO05D006182 5.3e-85 318.2 205 74.1
Potri.001G390500 Populus trichocarpa HOM05D005043 ORTHO05D006182 5.3e-85 318.2 212 72.2
BcaB06g29516 Brassica carinata HOM05D005043 ORTHO05D006182 1.2e-84 317.0 205 73.7
A05p34520 Brassica napus HOM05D005043 ORTHO05D006182 1.2e-84 317.0 205 73.7
BraA05t22272Z Brassica rapa HOM05D005043 ORTHO05D006182 1.2e-84 317.0 205 73.7
Migut.M00727 Erythranthe guttata HOM05D005043 ORTHO05D006182 1.2e-84 317.0 201 76.1
Aa31LG8G2100 Aethionema arabicum HOM05D005043 ORTHO05D006182 1.5e-84 316.6 212 71.7
BolC3t17001H Brassica oleracea HOM05D005043 ORTHO05D006182 1.5e-84 316.6 205 74.1
Manes.15G094900 Manihot esculenta HOM05D005043 ORTHO05D006182 1.5e-84 316.6 212 72.2
Lj1C829T6 Lonicera japonica HOM05D005043 ORTHO05D006182 2.6e-84 315.8 205 72.2
A03p39040 Brassica napus HOM05D005043 ORTHO05D006182 4.5e-84 315.1 205 73.7
C03p47310 Brassica napus HOM05D005043 ORTHO05D006182 4.5e-84 315.1 205 73.7
BraA03t13053Z Brassica rapa HOM05D005043 ORTHO05D006182 4.5e-84 315.1 205 73.7
Cc05_g11070 Coffea canephora HOM05D005043 ORTHO05D006182 5.8e-84 314.7 208 71.6
Sabra16G0255900 Salix brachista HOM05D005043 ORTHO05D006182 5.8e-84 314.7 205 72.7
BolC5t33915H Brassica oleracea HOM05D005043 ORTHO05D006182 1.3e-83 313.5 203 73.9
DCAR_017172 Daucus carota HOM05D005043 ORTHO05D006182 1.3e-83 313.5 202 73.8
BcaB06g25330 Brassica carinata HOM05D005043 ORTHO05D006182 2.2e-83 312.8 205 73.2
ECA240G3232 Erigeron canadensis HOM05D005043 ORTHO05D006182 2.2e-83 312.8 205 73.2
C05p52260 Brassica napus HOM05D005043 ORTHO05D006182 2.9e-83 312.4 206 73.3
Sp3g13100 Schrenkiella parvula HOM05D005043 ORTHO05D006182 2.9e-83 312.4 202 74.3
Oeu031030.1 Olea europaea HOM05D005043 ORTHO05D006182 4.9e-83 311.6 202 74.3
MSTRG.12865 Avicennia marina HOM05D005043 ORTHO05D006182 6.5e-83 311.2 200 73.5
Haze_09322 Corylus avellana HOM05D005043 ORTHO05D006182 6.5e-83 311.2 212 71.2
Sed0006465 Sechium edule HOM05D005043 ORTHO05D006182 1.1e-82 310.5 206 71.4
Thhalv10020510m.g Eutrema salsugineum HOM05D005043 ORTHO05D006182 3.2e-82 308.9 205 70.7
Atru.chr2.2132 Acer truncatum HOM05D005043 ORTHO05D006182 4.2e-82 308.5 205 70.7
THA.LOC104822566 Tarenaya hassleriana HOM05D005043 ORTHO05D006182 1.6e-81 306.6 203 73.4
CARHR089830 Cardamine hirsuta HOM05D005043 ORTHO05D006182 2.1e-81 306.2 199 74.4
Lsat_1_v5_gn_9_99860 Lactuca sativa HOM05D005043 ORTHO05D006182 3.5e-81 305.4 204 72.1
SGA_v2.0_scaffold70G23376 Striga asiatica HOM05D005043 ORTHO05D006182 7.9e-81 304.3 217 71.0
TWI38G0078 Tripterygium wilfordii HOM05D005043 ORTHO05D006182 1.3e-80 303.5 205 69.8
Peaxi162Scf00111g01457 Petunia axillaris HOM05D005043 ORTHO05D006182 2.3e-80 302.8 203 70.4
Sopen07g030670 Solanum pennellii HOM05D005043 ORTHO05D006182 3.9e-80 302.0 210 68.6
PSO384G1010 Papaver somniferum HOM05D005043 ORTHO05D006182 8.7e-80 300.8 202 71.8
vmacro23385 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 2.5e-79 299.3 204 69.6
EL10Ac4g08345 Beta vulgaris HOM05D005043 ORTHO05D006182 3.3e-79 298.9 206 69.9
PSO478G3490 Papaver somniferum HOM05D005043 ORTHO05D006182 7.4e-79 297.7 202 70.3
PSO782G2110 Papaver somniferum HOM05D005043 ORTHO05D006182 1.3e-78 297.0 202 70.3
SalBow8G1024 Salvia bowleyana HOM05D005043 ORTHO05D006182 1.3e-78 297.0 197 74.6
Eucgr.F01242 Eucalyptus grandis HOM05D005043 ORTHO05D006182 1.6e-78 296.6 209 66.5
Solyc07g062430.3 Solanum lycopersicum HOM05D005043 ORTHO05D006182 3.7e-78 295.4 210 67.1
PGSC0003DMG400007070 Solanum tuberosum HOM05D005043 ORTHO05D006182 3.7e-78 295.4 216 66.7
CAN.G375.16 Capsicum annuum HOM05D005043 ORTHO05D006182 8.2e-78 294.3 209 67.9
VMungo1127G0129 Vigna mungo HOM05D005043 ORTHO05D006182 1.1e-77 293.9 292 55.1
unitig_749.g13541 Utricularia gibba HOM05D005043 ORTHO05D006182 5.3e-77 291.6 205 68.8
Aqoxy7G03872 Aquilegia oxysepala HOM05D005043 ORTHO05D006182 1.3e-75 287.0 205 66.8
MBI06_g29324_MAGBIO Magnolia biondii HOM05D005043 ORTHO05D006182 9.4e-74 280.8 283 53.0
AUR62019576 Chenopodium quinoa HOM05D005043 ORTHO05D006182 1.6e-73 280.0 220 63.2
Lj3g0009561 Lotus japonicus HOM05D005043 ORTHO05D006182 5.1e-72 275.0 181 73.5
SalBow1G3547 Salvia bowleyana HOM05D005043 ORTHO05D006182 6.5e-67 258.1 197 67.0
HPP92_009836 Vanilla planifolia HOM05D005043 ORTHO05D006182 1.0e-64 250.8 184 65.2
QL08p026231 Quercus lobata HOM05D005043 ORTHO05D006182 2.6e-63 246.1 146 79.5
MELO3C025641.2 Cucumis melo HOM05D005043 ORTHO05D006182 6.3e-62 241.5 212 59.9
ATR1131G028 Amborella trichopoda HOM05D005043 ORTHO05D006182 1.1e-61 240.7 170 65.3
SMO137G0206 Selaginella moellendorffii HOM05D005043 ORTHO05D006182 1.8e-61 240.0 192 59.9
Os01g0737300 Oryza sativa ssp. japonica HOM05D005043 ORTHO05D006182 2.4e-61 239.6 166 68.1
Pp3c6_17140 Physcomitrium patens HOM05D005043 ORTHO05D006182 1.5e-60 236.9 203 57.6
Thecc.07G116500 Theobroma cacao HOM05D005043 ORTHO05D006182 7.2e-58 228.0 141 78.0
AUR62042780 Chenopodium quinoa HOM05D005043 ORTHO05D006182 3.6e-57 225.7 145 72.4
Mapoly0056s0069 Marchantia polymorpha HOM05D005043 ORTHO05D006182 2.6e-55 219.5 202 53.0
CBR_g66772 Chara braunii HOM05D005043 ORTHO05D006182 5.0e-51 205.3 202 52.0
AagrBONN_evm.TU.Sc2ySwM_228.1872 Anthoceros agrestis HOM05D005043 ORTHO05D006182 2.6e-47 193.0 164 56.1
Ah.04g164250 Amaranthus hybridus HOM05D005043 ORTHO05D006182 8.5e-43 177.9 119 72.3
Sc16g0007590 Simmondsia chinensis HOM05D005043 ORTHO05D006182 4.9e-38 162.2 146 57.5
Nitab4.5_0006953g0040 Nicotiana tabacum HOM05D005043 ORTHO05D006182 5.0e-35 152.1 202 43.1
Hma1.2p1_0113F.1_g055130 Hydrangea macrophylla HOM05D005043 ORTHO05D006182 4.0e-32 142.5 93 74.2
Psat3g077040 Pisum sativum HOM05D005043 ORTHO05D006182 1.3e-30 137.5 134 55.2
MCO04G542 Micromonas commoda HOM05D005043 ORTHO05D006182 4.3e-26 122.5 190 38.9
Nitab4.5_0003565g0060 Nicotiana tabacum HOM05D005043 ORTHO05D006182 4.7e-25 119.0 86 65.1
Cre09.g388726 Chlamydomonas reinhardtii HOM05D005043 ORTHO05D006182 1.0e-24 117.9 182 37.9
SHI37131 Sapria himalayana HOM05D005043 ORTHO05D006182 3.2e-21 106.3 65 76.9
PRCOL_00001017 Prasinoderma coloniale HOM05D005043 ORTHO05D006182 2.5e-18 96.7 169 35.5
BcaNung07105 Brassica carinata HOM05D005043 ORTHO05D006182 4.0e-16 89.4 59 71.2
CSS0039124 Camellia sinensis var. sinensis HOM05D005043 ORTHO05D006182 1.5e-15 87.4 57 70.2
arahy.Tifrunner.gnm1.ann1.SEI0XU Arachis hypogaea HOM05D000735 ORTHO05D000838 2.9e-14 83.2 83 53.0
QL08p026221 Quercus lobata HOM05D005043 ORTHO05D006182 2.9e-14 83.2 75 56.0
Medtr6g052005 Medicago truncatula HOM05D005043 ORTHO05D006182 1.9e-13 80.5 45 86.7
AUR62042782 Chenopodium quinoa HOM05D005043 ORTHO05D006182 8.6e-11 71.6 51 66.7
Medtr6g464930 Medicago truncatula HOM05D005043 ORTHO05D006182 1.5e-10 70.9 48 62.5
CSS0012296 Camellia sinensis var. sinensis HOM05D005043 ORTHO05D006182 2.5e-10 70.1 37 86.5
SEGI_01303 Sequoiadendron giganteum HOM05D005043 ORTHO05D006182 5.6e-10 68.9 54 63.0
SMO175G0006 Selaginella moellendorffii HOM05D017119 ORTHO05D006182 2.6e-07 60.1 50 52.0
Actinidia09808 Actinidia chinensis HOM05D005043 ORTHO05D006182 1.3e-06 57.8 42 59.5
RcHm_v2.0_Chr1g0352751 Rosa chinensis HOM05D005043 ORTHO05D006182 6.4e-06 55.5 33 69.7


User provided reference genes

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