Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 7.5e-144 513.8 260 100.0
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 7.0e-142 507.3 260 98.5
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 4.6e-109 398.3 260 80.8
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.6e-106 389.8 264 78.0
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 6.4e-103 377.9 261 75.9
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 9.3e-102 374.0 261 75.1
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 2.3e-100 369.4 261 73.6
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 3.1e-97 359.0 255 71.4
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 3.4e-96 355.5 257 70.4
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 4.9e-95 351.7 257 69.6
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 2.1e-90 336.3 261 67.4
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.1e-89 334.0 256 67.2
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.8e-89 333.2 267 64.8
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 5.3e-89 331.6 256 66.8
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.5e-88 330.1 258 66.3
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 2.2e-87 326.2 255 66.3
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.2e-87 326.2 254 67.7
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 2.2e-87 326.2 242 66.5
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 3.8e-87 325.5 257 64.2
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.2e-85 320.5 247 66.4
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 1.6e-85 320.1 223 71.3
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 3.0e-84 315.8 253 64.0
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 5.1e-84 315.1 254 64.2
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 5.1e-84 315.1 254 64.2
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 5.1e-84 315.1 244 66.8
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 6.7e-84 314.7 246 66.3
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 8.7e-84 314.3 254 63.4
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 8.7e-84 314.3 257 63.8
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 1.1e-83 313.9 243 65.8
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 1.1e-83 313.9 255 66.3
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 1.5e-83 313.5 258 63.2
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 1.9e-83 313.2 257 63.4
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.5e-83 312.8 251 63.7
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 4.3e-83 312.0 258 62.0
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 7.4e-83 311.2 251 63.3
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.6e-83 310.8 252 65.9
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 9.6e-83 310.8 254 63.8
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.3e-82 310.5 251 63.3
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 1.6e-82 310.1 256 63.3
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 2.8e-82 309.3 261 63.6
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.8e-82 309.3 237 68.4
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 2.8e-82 309.3 243 67.5
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 3.7e-82 308.9 212 68.9
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 4.8e-82 308.5 256 60.2
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 4.8e-82 308.5 251 63.3
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 4.8e-82 308.5 261 63.6
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 8.2e-82 307.8 258 61.2
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 8.2e-82 307.8 256 64.8
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.4e-81 307.0 251 62.5
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 9.0e-81 304.3 261 60.5
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.2e-80 303.9 240 64.6
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.2e-80 303.9 256 63.7
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.2e-80 303.9 256 63.7
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 2.6e-80 302.8 261 59.4
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 1.3e-79 300.4 282 57.8
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 1.7e-79 300.1 251 62.2
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.2e-79 299.7 277 58.1
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 2.2e-79 299.7 241 65.1
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 2.9e-79 299.3 256 62.5
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.8e-79 298.9 243 65.0
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 4.2e-78 295.4 224 66.1
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 5.5e-78 295.0 273 57.1
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.2e-77 293.9 240 64.2
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.6e-77 293.5 205 69.8
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 1.8e-76 290.0 223 65.0
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.9e-76 288.9 234 60.7
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 5.1e-76 288.5 305 54.1
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 2.5e-75 286.2 256 58.2
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 7.4e-75 284.6 230 63.9
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 3.7e-74 282.3 240 62.1
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 8.2e-74 281.2 241 59.3
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 1.1e-73 280.8 257 58.4
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.1e-73 280.8 252 59.9
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.8e-73 280.0 228 61.0
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 4.1e-73 278.9 227 61.7
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 5.3e-73 278.5 243 60.1
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 2.0e-72 276.6 348 46.6
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 5.9e-72 275.0 252 60.3
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 1.1e-70 270.8 240 60.0
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.1e-70 270.8 253 57.3
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 5.5e-70 268.5 227 60.4
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 9.3e-70 267.7 205 62.4
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.1e-69 266.5 244 58.6
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.7e-69 266.2 284 53.5
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 8.7e-68 261.2 254 55.5
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 3.3e-67 259.2 265 57.7
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 7.4e-67 258.1 199 62.8
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 7.4e-67 258.1 199 62.8
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 9.7e-67 257.7 229 57.2
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 1.4e-65 253.8 247 53.4
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 6.9e-65 251.5 256 51.6
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 5.9e-64 248.4 263 52.5
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 7.7e-64 248.1 227 56.8
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 7.2e-62 241.5 179 63.7
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.7e-58 230.3 259 50.6
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.1e-57 227.6 215 57.2
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 5.3e-57 225.3 439 36.0
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.5e-54 216.5 259 49.4
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 2.4e-49 199.9 138 65.9
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 6.7e-44 181.8 159 56.6
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.8e-41 173.7 261 42.5
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.3e-39 167.5 221 42.5
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 2.2e-34 150.2 98 73.5
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.2e-32 144.4 233 36.1
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.7e-32 143.3 151 55.0
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 3.8e-31 139.4 97 63.9
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 3.3e-30 136.3 261 39.1
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 8.3e-26 121.7 119 60.5
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.5e-24 116.3 135 48.1
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.8e-21 106.7 252 30.2
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 6.1e-21 105.5 245 30.2
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 9.8e-19 98.2 100 49.0
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 4.9e-18 95.9 131 42.0
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 9.2e-17 91.7 169 36.1
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 2.3e-15 87.0 100 53.0
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 7.3e-14 82.0 111 49.5
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 4.0e-12 76.3 98 50.0
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 6.8e-12 75.5 56 57.1
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.2e-11 74.7 85 50.6
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 2.6e-11 73.6 141 31.9
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 6.4e-10 68.9 86 47.7
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 2.4e-09 67.0 46 60.9
Pp3c1_15160 Physcomitrium patens HOM05D000160 ORTHO05D316923 4.1e-09 66.2 146 25.3
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 7.8e-08 62.0 166 27.7
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.5e-06 57.8 154 26.0
Pp3c19_13839 Physcomitrium patens HOM05D006635 ORTHO05D008047 5.6e-06 55.8 100 36.0


User provided reference genes

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