Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb226410 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb434960 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb435750 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb437130 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb437780 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Zm00001eb438310 Zea mays HOM05D000216 ORTHO05D000634 5.6e-33 143.7 71 100.0
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 6.4e-29 130.2 71 91.5
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.8e-16 88.2 73 61.6
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 6.2e-16 87.0 73 61.6
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 6.8e-15 83.6 73 60.3
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 6.8e-15 83.6 73 60.3
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 56.2
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-14 81.3 73 58.9
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 5.8e-14 80.5 73 58.9
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 5.8e-14 80.5 73 56.2
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 5.8e-14 80.5 73 56.2
MELO3C000330.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.3e-13 79.3 73 56.2
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.7e-13 79.0 73 57.5
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.7e-13 79.0 73 57.5
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.7e-13 79.0 73 57.5
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.7e-13 79.0 73 57.5
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.7e-13 79.0 73 57.5
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-13 78.2 73 57.5
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 3.7e-13 77.8 73 54.8
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 3.7e-13 77.8 73 54.8
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 3.7e-13 77.8 73 54.8
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 3.7e-13 77.8 73 54.8
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 3.7e-13 77.8 73 57.5
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 4.9e-13 77.4 75 53.3
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 6.4e-13 77.0 73 54.8
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-13 77.0 73 56.2
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 8.3e-13 76.6 73 54.8
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.1e-12 76.3 63 57.1
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 1.1e-12 76.3 73 54.8
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 1.4e-12 75.9 61 57.4
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.4e-12 75.9 73 54.8
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 1.4e-12 75.9 73 54.8
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.9e-12 75.5 72 55.6
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 3.2e-12 74.7 74 51.4
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 3.2e-12 74.7 73 54.8
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 4.1e-12 74.3 70 54.3
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.4e-12 73.9 70 58.6
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 5.4e-12 73.9 70 58.6
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.4e-12 73.9 70 58.6
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.4e-12 73.9 70 58.6
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 5.4e-12 73.9 70 58.6
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 7.1e-12 73.6 73 53.4
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 1.2e-11 72.8 73 52.1
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 2.1e-11 72.0 73 52.1
Lalb_Chr06g0173011 Lupinus albus HOM05D000216 ORTHO05D000634 3.5e-11 71.2 73 52.1
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 7.8e-11 70.1 70 57.1
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 3.9e-10 67.8 73 49.3
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 5.1e-10 67.4 68 55.9
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 1.5e-09 65.9 65 53.8
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 7.3e-09 63.5 60 56.7
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 4.7e-08 60.8 62 51.6
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-07 59.7 69 49.3
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.8e-07 58.9 50 60.0
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 73 45.2
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 4.4e-06 54.3 44 61.4
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 4.4e-06 54.3 58 48.3
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 7.6e-06 53.5 55 47.3


User provided reference genes

Program Settings