Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb314270 Zea mays HOM05D001514 ORTHO05D005209 7.0e-130 467.2 226 100.0
Os09g0443500 Oryza sativa ssp. japonica HOM05D001514 ORTHO05D005209 6.6e-112 407.5 227 86.8
HPP92_009229 Vanilla planifolia HOM05D001514 ORTHO05D005209 1.5e-79 300.1 218 63.8
MBI13_g11335_MAGBIO Magnolia biondii HOM05D001514 ORTHO05D005209 8.4e-75 284.3 219 60.3
TWI60G0494 Tripterygium wilfordii HOM05D001514 ORTHO05D005209 1.2e-73 280.4 222 57.2
CsaV3_2G001190 Cucumis sativus L. HOM05D001514 ORTHO05D005209 2.1e-73 279.6 219 58.0
Nn8g38685 Nelumbo nucifera HOM05D001514 ORTHO05D005209 4.6e-73 278.5 219 57.5
Prupe.7G201200 Prunus persica HOM05D001514 ORTHO05D005209 1.3e-72 276.9 219 57.5
Potri.006G143400 Populus trichocarpa HOM05D001514 ORTHO05D005209 1.7e-72 276.6 222 56.8
SalBow6G1458 Salvia bowleyana HOM05D001514 ORTHO05D005209 2.3e-72 276.2 217 56.7
EL10Ac8g19111 Beta vulgaris HOM05D001514 ORTHO05D005209 1.5e-71 273.5 219 55.3
Cc06_g12020 Coffea canephora HOM05D001514 ORTHO05D005209 1.5e-71 273.5 217 54.8
SGA_v2.0_scaffold97G29140 Striga asiatica HOM05D001514 ORTHO05D005209 1.5e-71 273.5 217 55.8
Migut.J00937 Erythranthe guttata HOM05D001514 ORTHO05D005209 1.9e-71 273.1 217 57.1
TAR626G0523 Trochodendron aralioides HOM05D001514 ORTHO05D005209 2.5e-71 272.7 219 55.7
TAR626G1304 Trochodendron aralioides HOM05D001514 ORTHO05D005209 2.5e-71 272.7 219 55.7
Thecc.09G079100 Theobroma cacao HOM05D001514 ORTHO05D005209 4.3e-71 271.9 219 56.6
MSTRG.6002 Avicennia marina HOM05D001514 ORTHO05D005209 5.6e-71 271.6 217 56.2
Ciclev10012695m.g Citrus clementina HOM05D001514 ORTHO05D005209 7.3e-71 271.2 218 56.4
Haze_10270 Corylus avellana HOM05D001514 ORTHO05D005209 9.6e-71 270.8 218 55.5
Sed0009954 Sechium edule HOM05D001514 ORTHO05D005209 9.6e-71 270.8 218 56.0
CiPaw.03G207800 Carya illinoinensis HOM05D001514 ORTHO05D005209 1.3e-70 270.4 219 55.3
Dinv42376 Davidia involucrata HOM05D001514 ORTHO05D005209 1.3e-70 270.4 217 55.8
Atru.chr7.1692 Acer truncatum HOM05D001514 ORTHO05D005209 1.6e-70 270.0 220 56.4
Eucgr.C00825 Eucalyptus grandis HOM05D001514 ORTHO05D005209 2.8e-70 269.2 218 55.0
Hund08725 Selenicereus undatus HOM05D001514 ORTHO05D005209 4.8e-70 268.5 216 54.6
ATR0598G338 Amborella trichopoda HOM05D001514 ORTHO05D005209 8.1e-70 267.7 219 55.7
Nitab4.5_0011363g0010 Nicotiana tabacum HOM05D001514 ORTHO05D005209 8.1e-70 267.7 217 54.8
TAR383G0900 Trochodendron aralioides HOM05D001514 ORTHO05D005209 8.1e-70 267.7 219 53.0
COL.COLO4_18112 Corchorus olitorius HOM05D001514 ORTHO05D005209 1.4e-69 266.9 219 55.3
ClCG11G001470 Citrullus lanatus HOM05D001514 ORTHO05D005209 1.8e-69 266.5 237 53.6
Solyc12g009090.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 3.1e-69 265.8 219 55.7
QL11p000460 Quercus lobata HOM05D001514 ORTHO05D005209 4.0e-69 265.4 219 54.3
CSS0005970 Camellia sinensis var. sinensis HOM05D001514 ORTHO05D005209 5.3e-69 265.0 216 53.7
MD15G1215700 Malus domestica HOM05D001514 ORTHO05D005209 5.3e-69 265.0 222 54.5
SalBow3G1655 Salvia bowleyana HOM05D001514 ORTHO05D005209 5.3e-69 265.0 213 55.9
PGSC0003DMG400000323 Solanum tuberosum HOM05D001514 ORTHO05D005209 6.9e-69 264.6 219 55.3
RcHm_v2.0_Chr2g0094521 Rosa chinensis HOM05D001514 ORTHO05D005209 9.0e-69 264.2 224 54.0
Sopen12g004040 Solanum pennellii HOM05D001514 ORTHO05D005209 9.0e-69 264.2 219 55.3
Cpa.g.sc280.6 Carica papaya HOM05D001514 ORTHO05D005209 1.5e-68 263.5 219 54.8
AUR62025186 Chenopodium quinoa HOM05D001514 ORTHO05D005209 2.6e-68 262.7 218 53.2
Duzib168G1760 Durio zibethinus HOM05D001514 ORTHO05D005209 3.4e-68 262.3 215 55.3
Gohir.A13G191300 Gossypium hirsutum HOM05D001514 ORTHO05D005209 3.4e-68 262.3 219 53.9
Lsat_1_v5_gn_7_35041 Lactuca sativa HOM05D001514 ORTHO05D005209 3.4e-68 262.3 225 54.7
GSVIVG01015097001 Vitis vinifera HOM05D001514 ORTHO05D005209 4.5e-68 261.9 219 53.4
Gohir.D13G196700 Gossypium hirsutum HOM05D001514 ORTHO05D005209 5.8e-68 261.5 219 54.3
MD15G1215800 Malus domestica HOM05D001514 ORTHO05D005209 7.6e-68 261.2 219 54.3
Manes.03G199800 Manihot esculenta HOM05D001514 ORTHO05D005209 9.9e-68 260.8 222 52.7
Gorai.013G225400 Gossypium raimondii HOM05D001514 ORTHO05D005209 2.9e-67 259.2 219 53.9
Aa31sc437G10 Aethionema arabicum HOM05D001514 ORTHO05D005209 6.4e-67 258.1 225 52.9
BcaB02g10157 Brassica carinata HOM05D001514 ORTHO05D005209 1.1e-66 257.3 226 51.3
Nitab4.5_0000073g0250 Nicotiana tabacum HOM05D001514 ORTHO05D005209 1.1e-66 257.3 214 55.1
Sp4g11040 Schrenkiella parvula HOM05D001514 ORTHO05D005209 1.1e-66 257.3 225 52.4
AL4G21890 Arabidopsis lyrata HOM05D001514 ORTHO05D005209 1.4e-66 256.9 225 52.4
MELO3C004649.2 Cucumis melo HOM05D001514 ORTHO05D005209 1.4e-66 256.9 219 54.8
Hma1.2p1_0928F.1_g237710 Hydrangea macrophylla HOM05D001514 ORTHO05D005209 1.4e-66 256.9 213 54.5
Thhalv10002659m.g Eutrema salsugineum HOM05D001514 ORTHO05D005209 2.4e-66 256.1 225 52.0
AT2G28230 Arabidopsis thaliana HOM05D001514 ORTHO05D005209 3.2e-66 255.8 225 52.4
HanXRQChr09g0237811 Helianthus annuus HOM05D001514 ORTHO05D005209 3.2e-66 255.8 220 54.1
PGR142G1966 Punica granatum HOM05D001514 ORTHO05D005209 3.2e-66 255.8 219 54.8
BcaC02g10956 Brassica carinata HOM05D001514 ORTHO05D005209 4.2e-66 255.4 226 51.3
C04p23290 Brassica napus HOM05D001514 ORTHO05D005209 4.2e-66 255.4 226 51.3
Ca_21314_v3 Cicer arietinum L. HOM05D001514 ORTHO05D005209 7.1e-66 254.6 219 52.5
Sabra06G0113700 Salix brachista HOM05D001514 ORTHO05D005209 9.3e-66 254.2 245 49.8
Psat4g016720 Pisum sativum HOM05D001514 ORTHO05D005209 1.2e-65 253.8 219 53.0
ECA233G5402 Erigeron canadensis HOM05D001514 ORTHO05D005209 6.0e-65 251.5 226 52.2
FvH4_1g08420 Fragaria vesca HOM05D001514 ORTHO05D005209 7.9e-65 251.1 219 51.6
Lj4g0013364 Lotus japonicus HOM05D001514 ORTHO05D005209 1.0e-64 250.8 224 50.9
Carub.0004s0911 Capsella rubella HOM05D001514 ORTHO05D005209 1.8e-64 250.0 225 51.1
Haze_25985 Corylus avellana HOM05D001514 ORTHO05D005209 1.8e-64 250.0 255 47.1
Haze_25993 Corylus avellana HOM05D001514 ORTHO05D005209 1.8e-64 250.0 255 47.1
TPR.G9427 Trifolium pratense HOM05D001514 ORTHO05D005209 2.3e-64 249.6 224 50.4
A07p18760 Brassica napus HOM05D001514 ORTHO05D005209 3.9e-64 248.8 219 49.8
PSO210G4222 Papaver somniferum HOM05D001514 ORTHO05D005209 6.7e-64 248.1 221 53.8
Solyc05g041170.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 6.7e-64 248.1 224 48.2
BolC4t23831H Brassica oleracea HOM05D001514 ORTHO05D005209 8.7e-64 247.7 222 51.4
Aqoxy7G01057 Aquilegia oxysepala HOM05D001514 ORTHO05D005209 1.1e-63 247.3 218 47.2
Medtr2g063927 Medicago truncatula HOM05D001514 ORTHO05D005209 1.9e-63 246.5 224 51.3
Aqoxy7G01056 Aquilegia oxysepala HOM05D001514 ORTHO05D005209 4.3e-63 245.4 217 47.5
Medtr4g125510 Medicago truncatula HOM05D001514 ORTHO05D005209 4.3e-63 245.4 224 51.8
Phvul.003G131900 Phaseolus vulgaris HOM05D001514 ORTHO05D005209 4.3e-63 245.4 224 51.8
arahy.Tifrunner.gnm1.ann1.0DN5L0 Arachis hypogaea HOM05D001514 ORTHO05D005209 5.6e-63 245.0 223 49.3
arahy.Tifrunner.gnm1.ann1.0TW07M Arachis hypogaea HOM05D001514 ORTHO05D005209 5.6e-63 245.0 223 49.3
arahy.Tifrunner.gnm1.ann1.I7BKR8 Arachis hypogaea HOM05D001514 ORTHO05D005209 5.6e-63 245.0 223 49.3
Lj7A685T53 Lonicera japonica HOM05D001514 ORTHO05D005209 5.6e-63 245.0 260 45.8
Carub.0004s0910 Capsella rubella HOM05D001514 ORTHO05D005209 7.4e-63 244.6 219 49.8
Glyma.13G109300 Glycine max HOM05D001514 ORTHO05D005209 7.4e-63 244.6 224 50.4
Glyma.17G050300 Glycine max HOM05D001514 ORTHO05D005209 7.4e-63 244.6 224 50.4
PSO386G0176 Papaver somniferum HOM05D001514 ORTHO05D005209 1.3e-62 243.8 221 52.5
vmacro06328 Vaccinium macrocarpon HOM05D001514 ORTHO05D005209 1.6e-62 243.4 245 49.0
THA.LOC104808891 Tarenaya hassleriana HOM05D001514 ORTHO05D005209 2.1e-62 243.0 220 51.8
Lalb_Chr07g0181101 Lupinus albus HOM05D001514 ORTHO05D005209 1.4e-61 240.4 219 49.3
CDE05G2440 Ceratophyllum demersum HOM05D001514 ORTHO05D005209 3.1e-61 239.2 219 50.2
THA.LOC104826585 Tarenaya hassleriana HOM05D001514 ORTHO05D005209 5.3e-61 238.4 239 49.0
VMungo1215G3125 Vigna mungo HOM05D001514 ORTHO05D005209 6.9e-61 238.0 212 52.8
BraA07t29585Z Brassica rapa HOM05D001514 ORTHO05D005209 9.0e-61 237.7 215 48.4
AT4G09070 Arabidopsis thaliana HOM05D001514 ORTHO05D005209 1.3e-59 233.8 219 47.0
AUR62028988 Chenopodium quinoa HOM05D001514 ORTHO05D005209 1.1e-58 230.7 197 53.3
Nitab4.5_0001866g0080 Nicotiana tabacum HOM05D001514 ORTHO05D005209 9.3e-58 227.6 210 50.5
Solyc10g049510.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.1e-57 226.5 217 47.0
Solyc10g054950.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.7e-57 226.1 214 48.6
Thhalv10017586m.g Eutrema salsugineum HOM05D001514 ORTHO05D005209 3.9e-56 222.2 225 47.1
Carub.0006s2765 Capsella rubella HOM05D001514 ORTHO05D005209 2.5e-55 219.5 220 43.6
Peaxi162Scf00928g00034 Petunia axillaris HOM05D001514 ORTHO05D005209 1.6e-54 216.9 213 48.4
Sabra06G0112300 Salix brachista HOM05D001514 ORTHO05D005209 4.8e-54 215.3 160 61.9
Actinidia29922 Actinidia chinensis HOM05D001514 ORTHO05D005209 6.9e-53 211.5 184 51.1
Sc08g0008840 Simmondsia chinensis HOM05D001514 ORTHO05D005209 1.9e-50 203.4 156 59.0
Sc08g0009330 Simmondsia chinensis HOM05D001514 ORTHO05D005209 1.9e-50 203.4 156 59.0
CANSAT11G2059 Cannabis sativa HOM05D001514 ORTHO05D005209 4.2e-50 202.2 157 56.7
Solyc10g055100.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.2e-49 200.7 214 43.9
Rhsim03G0229200 Rhododendron simsii HOM05D001514 ORTHO05D005209 3.5e-49 199.1 155 57.4
CARHR121150 Cardamine hirsuta HOM05D001514 ORTHO05D005209 4.6e-49 198.7 225 43.1
PGSC0003DMG400027872 Solanum tuberosum HOM05D001514 ORTHO05D005209 4.6e-49 198.7 183 50.8
Mapoly0097s0017 Marchantia polymorpha HOM05D001514 ORTHO05D005209 6.1e-49 198.4 218 42.7
FAN26G1993 Fragaria x ananassa HOM05D001514 ORTHO05D005209 1.3e-48 197.2 156 55.8
Solyc10g054980.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 5.1e-48 195.3 221 42.1
CAN.G2532.1 Capsicum annuum HOM05D001514 ORTHO05D005209 8.7e-48 194.5 153 55.6
SMO141G0192 Selaginella moellendorffii HOM05D001514 ORTHO05D005209 1.1e-47 194.1 204 45.1
Solyc10g055160.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.1e-47 194.1 189 47.1
Solyc10g055020.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 5.7e-47 191.8 220 42.3
CAN.G1963.7 Capsicum annuum HOM05D001514 ORTHO05D005209 3.7e-46 189.1 158 53.8
Pp3c7_2780 Physcomitrium patens HOM05D001514 ORTHO05D005209 2.4e-45 186.4 211 45.0
FAN26G0729 Fragaria x ananassa HOM05D001514 ORTHO05D005209 5.3e-45 185.3 176 49.4
Actinidia38471 Actinidia chinensis HOM05D001514 ORTHO05D005209 4.5e-44 182.2 155 56.8
DCAR_024739 Daucus carota HOM05D001514 ORTHO05D005209 2.5e-42 176.4 147 55.1
Sopen10g024920 Solanum pennellii HOM05D001514 ORTHO05D005209 4.2e-42 175.6 152 52.0
unitig_749.g14240 Utricularia gibba HOM05D001514 ORTHO05D005209 1.2e-41 174.1 132 59.8
PGSC0003DMG400024425 Solanum tuberosum HOM05D001514 ORTHO05D005209 1.6e-41 173.7 175 45.1
Psat0s2317g0240 Pisum sativum HOM05D001514 ORTHO05D005209 7.9e-41 171.4 215 39.5
Psat0s4474g0080 Pisum sativum HOM05D001514 ORTHO05D005209 7.9e-41 171.4 215 39.1
CAN.G299.3 Capsicum annuum HOM05D001514 ORTHO05D005209 1.4e-40 170.6 116 68.1
AagrBONN_evm.TU.Sc2ySwM_344.5098 Anthoceros agrestis HOM05D001514 ORTHO05D005209 3.0e-40 169.5 192 45.8
CAN.G1774.14 Capsicum annuum HOM05D001514 ORTHO05D005209 3.0e-40 169.5 133 56.4
CBR_g11153 Chara braunii HOM05D001514 ORTHO05D005209 3.9e-40 169.1 221 37.1
Nitab4.5_0000073g0220 Nicotiana tabacum HOM05D001514 ORTHO05D005209 4.3e-39 165.6 142 52.1
DCAR_026438 Daucus carota HOM05D001514 ORTHO05D005209 6.3e-38 161.8 147 51.0
Solyc10g055070.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 6.3e-38 161.8 152 50.0
PGSC0003DMG400003348 Solanum tuberosum HOM05D001514 ORTHO05D005209 5.3e-37 158.7 115 61.7
Solyc10g055150.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 7.7e-36 154.8 128 56.2
Sopen10g024960 Solanum pennellii HOM05D001514 ORTHO05D005209 1.7e-35 153.7 115 61.7
PGSC0003DMG400040125 Solanum tuberosum HOM05D001514 ORTHO05D005209 5.5e-34 148.7 206 38.8
Solyc10g055010.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.7e-33 146.4 151 44.4
Solyc10g055130.2 Solanum lycopersicum HOM05D001514 ORTHO05D005209 6.1e-33 145.2 114 59.6
Solyc10g049550.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.3e-32 143.3 128 50.0
Manes.15G009400 Manihot esculenta HOM05D001514 ORTHO05D005209 8.8e-32 141.4 121 57.0
MD02G1088400 Malus domestica HOM05D001514 ORTHO05D005209 1.1e-31 141.0 183 40.4
Sopen10g024890 Solanum pennellii HOM05D001514 ORTHO05D005209 1.6e-25 120.6 96 57.3
Sopen10g024880 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-21 106.3 91 53.8
DCAR_024738 Daucus carota HOM05D001514 ORTHO05D005209 8.8e-16 88.2 78 52.6
Sopen12g011120 Solanum pennellii HOM05D001514 ORTHO05D005209 2.0e-15 87.0 70 54.3
Potri.005G126902 Populus trichocarpa HOM05D001514 ORTHO05D005209 2.8e-14 83.2 77 51.9
Solyc10g055040.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.8e-13 80.5 150 31.3
Oeu055661.2 Olea europaea HOM05D001514 ORTHO05D005209 5.9e-12 75.5 51 58.8
Solyc12g062270.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 5.0e-11 72.4 64 51.6
Cre11.g476900 Chlamydomonas reinhardtii HOM05D001514 ORTHO05D005209 1.5e-10 70.9 177 27.1
Rhsim03G0228900 Rhododendron simsii HOM05D001514 ORTHO05D005209 1.5e-10 70.9 50 54.0
AT2G28020 Arabidopsis thaliana HOM05D001514 ORTHO05D005209 3.2e-10 69.7 65 49.2
CAN.G1963.4 Capsicum annuum HOM05D001514 ORTHO05D005209 4.9e-06 55.8 136 25.0


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