Gene: Sopen10g024880

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g024880
  • Transcript Identifier Sopen10g024880.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 67174063-67196901 : negative

Gene Family Information

  • ID HOM05D000004
  • #Genes/#Species 19584/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g024880.1

Descriptions

  • Description Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), TATA-binding related factor (TRF) of subunit 20 of Mediator complex | FUNCTIONS IN: RNA polymerase II transcription mediator activity | INVOLVED IN: regulation of transcription from RNA polymerase II promoter | LOCATED IN: mediator complex | CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med20 | BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003712
IEA
InterProtranscription coregulator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016592
IEA
InterPromediator complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043502 DNA/RNA polymerase superfamily
IPR001878 Zinc finger, CCHC-type
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
IPR013921 Mediator complex, subunit Med20
IPR021109 Aspartic peptidase domain superfamily
IPR036875 Zinc finger, CCHC-type superfamily
Mapman id Description
15.3.4.4.1.7 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.head module.component MED20