Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb038330 Zea mays HOM05D001670 ORTHO05D002980 5.6e-110 401.0 206 100.0
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 7.1e-97 357.5 188 97.9
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 1.8e-92 342.8 188 93.6
Zm00001eb131800 Zea mays HOM05D001670 ORTHO05D002980 7.9e-80 300.8 168 92.3
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.3e-79 300.1 188 84.6
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 1.6e-72 276.6 178 82.6
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 1.1e-70 270.4 185 76.8
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 3.7e-69 265.4 193 74.1
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 4.8e-69 265.0 193 73.1
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 5.3e-68 261.5 186 73.7
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 2.6e-67 259.2 184 74.5
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 5.9e-67 258.1 211 68.2
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 1.0e-66 257.3 186 73.1
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 6.5e-66 254.6 176 74.4
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.1e-65 253.8 187 70.6
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 4.2e-65 251.9 160 80.0
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 5.5e-65 251.5 168 75.0
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 3.0e-63 245.7 185 70.3
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 5.1e-63 245.0 169 76.3
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 6.7e-63 244.6 175 73.1
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 8.8e-63 244.2 180 71.1
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 1.5e-62 243.4 179 70.9
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 1.5e-62 243.4 154 77.3
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 2.0e-62 243.0 168 72.6
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 3.3e-62 242.3 175 72.0
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 3.3e-62 242.3 175 72.0
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 4.4e-62 241.9 189 69.3
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 4.4e-62 241.9 189 69.3
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 4.4e-62 241.9 177 70.6
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 4.4e-62 241.9 177 70.6
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 5.7e-62 241.5 177 69.5
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 5.7e-62 241.5 190 67.9
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 7.4e-62 241.1 169 72.2
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 7.4e-62 241.1 169 72.2
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 9.7e-62 240.7 169 73.4
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 9.7e-62 240.7 179 71.5
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 9.7e-62 240.7 175 71.4
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 1.3e-61 240.4 190 68.4
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 1.3e-61 240.4 199 66.3
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 1.3e-61 240.4 170 72.4
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.7e-61 240.0 185 67.6
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 1.7e-61 240.0 186 67.7
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 2.2e-61 239.6 192 66.1
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 2.2e-61 239.6 192 66.7
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 2.2e-61 239.6 161 75.2
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 2.8e-61 239.2 161 75.8
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 2.8e-61 239.2 170 72.4
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 2.8e-61 239.2 192 67.7
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 2.8e-61 239.2 180 69.4
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 3.7e-61 238.8 160 75.6
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 3.7e-61 238.8 189 68.8
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 3.7e-61 238.8 185 68.1
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.8e-61 238.4 174 70.7
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 6.3e-61 238.0 178 69.1
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 6.3e-61 238.0 178 69.1
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 6.3e-61 238.0 154 77.3
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 6.3e-61 238.0 174 70.7
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 8.2e-61 237.7 174 70.7
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 8.2e-61 237.7 175 70.9
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 8.2e-61 237.7 183 69.4
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 8.2e-61 237.7 190 67.9
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 8.2e-61 237.7 154 76.0
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.1e-60 237.3 179 70.4
Hma1.2p1_0341F.1_g130250 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 1.4e-60 236.9 154 75.3
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 1.8e-60 236.5 189 66.1
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.8e-60 236.5 173 68.8
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 2.4e-60 236.1 186 67.2
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 3.1e-60 235.7 175 71.4
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 3.1e-60 235.7 188 67.0
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 4.1e-60 235.3 175 69.7
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 5.3e-60 235.0 175 69.1
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 5.3e-60 235.0 154 73.4
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 5.3e-60 235.0 154 73.4
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 5.3e-60 235.0 154 73.4
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 5.3e-60 235.0 154 73.4
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 5.3e-60 235.0 147 77.6
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 6.9e-60 234.6 187 67.9
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 6.9e-60 234.6 183 67.8
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 6.9e-60 234.6 190 65.8
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 9.1e-60 234.2 177 70.1
Zm00001eb387200 Zea mays HOM05D001670 ORTHO05D002980 9.1e-60 234.2 132 89.4
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 1.2e-59 233.8 188 68.1
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 1.2e-59 233.8 187 66.8
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 1.5e-59 233.4 204 64.7
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.5e-59 233.4 154 72.7
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.5e-59 233.4 154 72.7
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 1.5e-59 233.4 175 69.7
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 1.5e-59 233.4 175 69.7
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.0e-59 233.0 154 72.7
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 2.0e-59 233.0 193 65.8
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 2.0e-59 233.0 183 67.8
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 2.6e-59 232.6 183 67.2
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.6e-59 232.6 157 73.2
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 4.5e-59 231.9 180 67.8
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 4.5e-59 231.9 159 73.0
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 5.9e-59 231.5 194 64.9
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 1.0e-58 230.7 188 67.6
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 1.0e-58 230.7 175 68.6
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 2.9e-58 229.2 188 64.9
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 5.0e-58 228.4 184 66.8
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 5.0e-58 228.4 150 76.7
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 5.0e-58 228.4 174 68.4
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 6.5e-58 228.0 188 64.4
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 6.5e-58 228.0 179 68.7
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 6.5e-58 228.0 179 68.7
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 6.5e-58 228.0 179 68.7
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 6.5e-58 228.0 154 74.0
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 8.5e-58 227.6 189 66.7
A09p69240 Brassica napus HOM05D001670 ORTHO05D002980 1.1e-57 227.3 190 65.8
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 1.1e-57 227.3 190 65.8
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 1.4e-57 226.9 179 67.6
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 1.4e-57 226.9 179 67.6
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 1.4e-57 226.9 196 63.8
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 1.4e-57 226.9 196 63.8
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 2.5e-57 226.1 189 66.7
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 2.5e-57 226.1 189 66.7
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 3.2e-57 225.7 192 62.5
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 4.2e-57 225.3 181 65.7
Thecc.03G154200 Theobroma cacao HOM05D001670 ORTHO05D002980 5.5e-57 224.9 148 73.0
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 1.2e-56 223.8 158 69.6
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 2.7e-56 222.6 190 65.8
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 2.7e-56 222.6 188 63.3
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 3.6e-56 222.2 190 62.6
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 4.7e-56 221.9 148 74.3
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 6.1e-56 221.5 189 65.6
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 6.1e-56 221.5 189 63.5
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 6.1e-56 221.5 165 66.7
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 1.0e-55 220.7 160 70.6
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 1.0e-55 220.7 189 65.6
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 1.8e-55 219.9 179 67.6
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 3.9e-55 218.8 163 68.7
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 8.8e-55 217.6 196 60.7
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 2.6e-54 216.1 142 74.6
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 4.4e-54 215.3 148 72.3
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 5.7e-54 214.9 216 56.0
Zm00001eb208290 Zea mays HOM05D001670 ORTHO05D002980 7.4e-54 214.5 111 97.3
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 9.7e-54 214.2 150 73.3
Zm00001eb177620 Zea mays HOM05D001670 ORTHO05D002980 1.3e-53 213.8 111 96.4
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.7e-53 213.4 192 64.1
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 2.8e-53 212.6 179 63.1
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 3.7e-53 212.2 180 63.3
BraA09t35680Z Brassica rapa HOM05D001670 ORTHO05D002980 2.6e-51 206.1 141 70.9
Haze_02722 Corylus avellana HOM05D001670 ORTHO05D002980 7.7e-51 204.5 122 81.1
BolC9t52941H Brassica oleracea HOM05D001670 ORTHO05D002980 2.2e-50 203.0 141 68.8
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.2e-50 203.0 180 62.2
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 3.8e-50 202.2 145 67.6
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 6.5e-50 201.4 146 70.5
MBI02_g40780_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D012267 1.1e-49 200.7 122 79.5
C09p00060 Brassica napus HOM05D001670 ORTHO05D002980 4.0e-47 192.2 166 60.2
BcaC04g24208 Brassica carinata HOM05D001670 ORTHO05D002980 2.6e-46 189.5 166 59.0
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 2.6e-46 189.5 159 62.9
CARHR248060 Cardamine hirsuta HOM05D001670 ORTHO05D002980 9.1e-44 181.0 125 72.0
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 9.1e-44 181.0 166 61.4
CSS0016099 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 2.0e-43 179.9 102 85.3
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 4.5e-43 178.7 138 59.4
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 1.5e-41 173.7 163 58.9
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 2.7e-40 169.5 144 59.0
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 3.6e-40 169.1 171 56.1
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 6.1e-40 168.3 170 57.1
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 1.2e-35 154.1 180 47.2
HanXRQChr16g0519701 Helianthus annuus HOM05D001670 ORTHO05D002980 4.5e-35 152.1 142 54.9
SHI13578 Sapria himalayana HOM05D001670 ORTHO05D002980 2.9e-34 149.4 185 49.2
Rhsim04G0099300 Rhododendron simsii HOM05D004426 ORTHO05D005417 1.2e-32 144.1 192 45.8
CDE11G1021 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 3.6e-32 142.5 79 89.9
Zm00001eb235140 Zea mays HOM05D001670 ORTHO05D002980 3.0e-31 139.4 74 94.6
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 4.4e-30 135.6 190 44.7
Zm00001eb306860 Zea mays HOM05D001670 ORTHO05D006093 1.7e-29 133.7 66 98.5
MBI02_g19788_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 2.8e-29 132.9 79 82.3
MBI06_g17804_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.7e-26 123.6 74 77.0
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 6.1e-24 115.2 148 41.2
BcaNung05012 Brassica carinata HOM05D001670 ORTHO05D002980 1.0e-23 114.4 118 55.1
Haze_26936 Corylus avellana HOM05D001670 ORTHO05D002980 2.2e-21 106.7 129 42.6
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 3.7e-21 105.9 65 80.0
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 3.7e-21 105.9 65 80.0
CDE11G0646 Ceratophyllum demersum HOM05D001670 ORTHO05D017370 8.6e-18 94.7 84 64.3
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 1.8e-15 87.0 123 34.1
Zm00001eb133400 Zea mays HOM05D013194 ORTHO05D015061 5.2e-15 85.5 62 72.6
Zm00001eb237010 Zea mays HOM05D001670 ORTHO05D005610 8.9e-15 84.7 56 76.8
Actinidia20646 Actinidia chinensis HOM05D001670 ORTHO05D010670 1.2e-14 84.3 50 82.0
ECA234G2815 Erigeron canadensis HOM05D001670 ORTHO05D002980 5.8e-14 82.0 69 52.2
Zm00001eb129840 Zea mays HOM05D001670 ORTHO05D006093 6.4e-13 78.6 44 88.6
Actinidia20636 Actinidia chinensis HOM05D001670 ORTHO05D006082 3.2e-12 76.3 47 83.0
MBI18_g42385_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.2e-11 74.3 45 82.2
Rhsim04G0126200 Rhododendron simsii HOM05D001670 ORTHO05D043322 7.3e-09 65.1 240 30.4
MBI06_g17057_MAGBIO Magnolia biondii HOM05D000255 ORTHO05D002980 1.5e-06 57.4 30 80.0
Actinidia00123 Actinidia chinensis HOM05D022240 ORTHO05D002980 7.5e-06 55.1 84 45.2


User provided reference genes

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