Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo1215G0906 Vigna mungo HOM05D001758 ORTHO05D017200 3.5e-189 664.8 348 100.0
VMungo1215G2939 Vigna mungo HOM05D001758 ORTHO05D004430 5.1e-31 139.4 92 77.2
Glyma.11G015700 Glycine max HOM05D001758 ORTHO05D004430 6.7e-31 139.0 92 76.1
Phvul.002G034100 Phaseolus vulgaris HOM05D001758 ORTHO05D004430 1.5e-30 137.9 92 76.1
Glyma.01G227000 Glycine max HOM05D001758 ORTHO05D004430 2.6e-30 137.1 92 75.0
Lalb_Chr16g0376841 Lupinus albus HOM05D001758 ORTHO05D004430 1.1e-28 131.7 92 70.7
Lalb_Chr05g0211451 Lupinus albus HOM05D001758 ORTHO05D004430 2.4e-28 130.6 92 67.4
QL12p032420 Quercus lobata HOM05D001758 ORTHO05D004430 2.4e-28 130.6 93 68.8
Cpa.g.sc180.10 Carica papaya HOM05D001758 ORTHO05D017200 1.2e-27 128.3 91 70.3
Glyma.11G095501 Glycine max HOM05D001758 ORTHO05D004430 1.2e-27 128.3 91 68.1
Gohir.A03G019300 Gossypium hirsutum HOM05D001758 ORTHO05D004430 1.5e-27 127.9 76 78.9
Gohir.D03G149700 Gossypium hirsutum HOM05D001758 ORTHO05D004430 1.5e-27 127.9 76 78.9
Thecc.03G282700 Theobroma cacao HOM05D001758 ORTHO05D004430 2.6e-27 127.1 76 78.9
Gorai.003G157000 Gossypium raimondii HOM05D001758 ORTHO05D004430 3.4e-27 126.7 76 77.6
TPR.G22570 Trifolium pratense HOM05D001758 ORTHO05D004430 3.4e-27 126.7 91 67.0
Duzib084G0730 Durio zibethinus HOM05D001758 ORTHO05D004430 4.5e-27 126.3 76 78.9
Glyma.12G021600 Glycine max HOM05D001758 ORTHO05D004430 4.5e-27 126.3 91 68.1
COL.COLO4_34497 Corchorus olitorius HOM05D001758 ORTHO05D004430 5.9e-27 125.9 76 77.6
Medtr4g076210 Medicago truncatula HOM05D001758 ORTHO05D004430 5.9e-27 125.9 91 65.9
arahy.Tifrunner.gnm1.ann1.AY0C6D Arachis hypogaea HOM05D001758 ORTHO05D004430 1.3e-26 124.8 91 68.1
arahy.Tifrunner.gnm1.ann1.KK02P6 Arachis hypogaea HOM05D001758 ORTHO05D004430 1.3e-26 124.8 91 68.1
CiPaw.12G091200 Carya illinoinensis HOM05D001758 ORTHO05D004430 1.3e-26 124.8 91 67.0
Duzib205G0508 Durio zibethinus HOM05D001758 ORTHO05D004430 1.7e-26 124.4 76 77.6
Lj3g0022998 Lotus japonicus HOM05D001758 ORTHO05D004430 2.9e-26 123.6 91 65.9
Psat7g179680 Pisum sativum HOM05D001758 ORTHO05D004430 2.9e-26 123.6 91 68.1
VMungo1127G1185 Vigna mungo HOM05D001758 ORTHO05D004430 3.8e-26 123.2 91 65.9
CANSAT21G2030 Cannabis sativa HOM05D001758 ORTHO05D004430 6.5e-26 122.5 93 65.6
Manes.02G136100 Manihot esculenta HOM05D001758 ORTHO05D004430 8.5e-26 122.1 91 62.6
Potri.003G130400 Populus trichocarpa HOM05D001758 ORTHO05D004430 8.5e-26 122.1 91 64.8
Cfa012203 Carpinus fangiana HOM05D001758 ORTHO05D004430 1.1e-25 121.7 76 75.0
MELO3C005693.2 Cucumis melo HOM05D001758 ORTHO05D004430 1.1e-25 121.7 91 63.7
ClCG01G002530 Citrullus lanatus HOM05D001758 ORTHO05D004430 1.4e-25 121.3 91 62.6
Gohir.D08G202500 Gossypium hirsutum HOM05D001758 ORTHO05D004430 1.4e-25 121.3 78 71.8
Peaxi162Scf00074g02036 Petunia axillaris HOM05D001758 ORTHO05D004430 1.4e-25 121.3 91 63.7
Sed0001016 Sechium edule HOM05D001758 ORTHO05D004430 1.4e-25 121.3 91 60.4
Haze_08813 Corylus avellana HOM05D001758 ORTHO05D004430 2.5e-25 120.6 76 73.7
Gohir.A08G184000 Gossypium hirsutum HOM05D001758 ORTHO05D004430 3.2e-25 120.2 78 70.5
Gorai.004G213900 Gossypium raimondii HOM05D001758 ORTHO05D004430 3.2e-25 120.2 78 70.5
RcHm_v2.0_Chr7g0197091 Rosa chinensis HOM05D001758 ORTHO05D004430 3.2e-25 120.2 91 62.6
Ciclev10018786m.g Citrus clementina HOM05D001758 ORTHO05D004430 4.2e-25 119.8 76 75.0
Dinv38922 Davidia involucrata HOM05D001758 ORTHO05D004430 4.2e-25 119.8 91 64.8
Potri.001G101400 Populus trichocarpa HOM05D001758 ORTHO05D004430 4.2e-25 119.8 74 77.0
CsaV3_5G002640 Cucumis sativus L. HOM05D001758 ORTHO05D004430 5.5e-25 119.4 91 62.6
Solyc08g081320.3 Solanum lycopersicum HOM05D001758 ORTHO05D004430 5.5e-25 119.4 91 63.7
Sopen08g029630 Solanum pennellii HOM05D001758 ORTHO05D004430 5.5e-25 119.4 91 63.7
Phvul.011G078200 Phaseolus vulgaris HOM05D001758 ORTHO05D004430 7.2e-25 119.0 71 78.9
TWI60G1699 Tripterygium wilfordii HOM05D001758 ORTHO05D004430 7.2e-25 119.0 91 60.4
Prupe.5G103900 Prunus persica HOM05D001758 ORTHO05D004430 9.4e-25 118.6 91 62.6
Atru.chr9.2154 Acer truncatum HOM05D001758 ORTHO05D004430 1.6e-24 117.9 74 74.3
Sabra01G0076400 Salix brachista HOM05D001758 ORTHO05D004430 1.6e-24 117.9 74 75.7
PGSC0003DMG400012194 Solanum tuberosum HOM05D001758 ORTHO05D004430 1.6e-24 117.9 91 63.7
MD06G1087800 Malus domestica HOM05D001758 ORTHO05D004430 2.1e-24 117.5 91 61.5
Oeu007743.2 Olea europaea HOM05D001758 ORTHO05D004430 2.1e-24 117.5 96 63.5
CAN.G532.6 Capsicum annuum HOM05D001758 ORTHO05D004430 2.7e-24 117.1 91 61.5
Eucgr.D01829 Eucalyptus grandis HOM05D001758 ORTHO05D004430 2.7e-24 117.1 91 60.4
FvH4_5g02830 Fragaria vesca HOM05D001758 ORTHO05D004430 2.7e-24 117.1 91 59.3
FAN04G0007 Fragaria x ananassa HOM05D001758 ORTHO05D004430 2.7e-24 117.1 91 59.3
FAN08G0671 Fragaria x ananassa HOM05D001758 ORTHO05D004430 2.7e-24 117.1 91 59.3
FAN13G1114 Fragaria x ananassa HOM05D001758 ORTHO05D004430 2.7e-24 117.1 91 59.3
Nitab4.5_0001522g0060 Nicotiana tabacum HOM05D001758 ORTHO05D004430 2.7e-24 117.1 91 61.5
SGA_v2.0_scaffold144G35913 Striga asiatica HOM05D001758 ORTHO05D004430 2.7e-24 117.1 91 62.6
FAN18G3406 Fragaria x ananassa HOM05D001758 ORTHO05D004430 3.6e-24 116.7 91 59.3
MD14G1108600 Malus domestica HOM05D001758 ORTHO05D004430 3.6e-24 116.7 91 61.5
THA.LOC104813023 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 3.6e-24 116.7 97 56.7
CSS0038252 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 4.7e-24 116.3 91 62.6
vmacro13146 Vaccinium macrocarpon HOM05D001758 ORTHO05D004430 4.7e-24 116.3 91 63.7
vmacro13195 Vaccinium macrocarpon HOM05D001758 ORTHO05D004430 4.7e-24 116.3 91 63.7
MELO3C018841.2 Cucumis melo HOM05D001758 ORTHO05D004430 6.1e-24 115.9 91 59.3
Migut.E01190 Erythranthe guttata HOM05D001758 ORTHO05D004430 6.1e-24 115.9 90 60.0
Actinidia27374 Actinidia chinensis HOM05D001758 ORTHO05D004430 7.9e-24 115.5 91 61.5
Rhsim07G0088700 Rhododendron simsii HOM05D001758 ORTHO05D004430 7.9e-24 115.5 91 61.5
Sabra03G0092700 Salix brachista HOM05D001758 ORTHO05D004430 7.9e-24 115.5 91 61.5
SalBow1G0547 Salvia bowleyana HOM05D001758 ORTHO05D004430 7.9e-24 115.5 91 61.5
Oeu011033.1 Olea europaea HOM05D001758 ORTHO05D004430 1.0e-23 115.2 93 60.2
MSTRG.1854 Avicennia marina HOM05D001758 ORTHO05D004430 1.4e-23 114.8 91 62.6
Nitab4.5_0002975g0020 Nicotiana tabacum HOM05D001758 ORTHO05D004430 2.3e-23 114.0 91 59.3
CSS0009285 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 3.0e-23 113.6 91 61.5
CSS0019297 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 3.0e-23 113.6 91 61.5
Cc08_g15000 Coffea canephora HOM05D001758 ORTHO05D004430 3.0e-23 113.6 91 60.4
ClCG02G002170 Citrullus lanatus HOM05D001758 ORTHO05D004430 3.9e-23 113.2 91 58.2
HanXRQChr13g0416041 Helianthus annuus HOM05D001758 ORTHO05D004430 5.2e-23 112.8 91 58.2
Lsat_1_v5_gn_6_86320 Lactuca sativa HOM05D001758 ORTHO05D004430 6.7e-23 112.5 76 68.4
Sed0023378 Sechium edule HOM05D001758 ORTHO05D004430 6.7e-23 112.5 93 59.1
SGA_v2.0_scaffold48G18078 Striga asiatica HOM05D001758 ORTHO05D004430 6.7e-23 112.5 91 60.4
THA.LOC104814663 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 8.8e-23 112.1 91 60.4
Aa31LG9G10850 Aethionema arabicum HOM05D001758 ORTHO05D004430 1.1e-22 111.7 90 61.1
CsaV3_7G003330 Cucumis sativus L. HOM05D001758 ORTHO05D004430 1.1e-22 111.7 91 58.2
Oeu042339.1 Olea europaea HOM05D001758 ORTHO05D004430 1.1e-22 111.7 93 58.1
BcaNung01436 Brassica carinata HOM05D001758 ORTHO05D017200 1.5e-22 111.3 90 57.8
BolC7t45772H Brassica oleracea HOM05D001758 ORTHO05D004430 1.5e-22 111.3 90 57.8
Os03g0355600 Oryza sativa ssp. japonica HOM05D001758 ORTHO05D004430 1.5e-22 111.3 97 57.7
THA.LOC104806416 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 1.5e-22 111.3 80 65.0
TAR625G0205 Trochodendron aralioides HOM05D001758 ORTHO05D004430 1.5e-22 111.3 76 69.7
DCAR_008367 Daucus carota HOM05D001758 ORTHO05D004430 2.0e-22 110.9 91 60.4
Lj8A218T22 Lonicera japonica HOM05D001758 ORTHO05D004430 2.0e-22 110.9 91 58.2
AT4G23460 Arabidopsis thaliana HOM05D001758 ORTHO05D004430 2.6e-22 110.5 90 56.7
Carub.0007s1765 Capsella rubella HOM05D001758 ORTHO05D004430 2.6e-22 110.5 90 56.7
A03p54320 Brassica napus HOM05D001758 ORTHO05D004430 3.3e-22 110.2 90 58.9
BraA03t14494Z Brassica rapa HOM05D001758 ORTHO05D004430 3.3e-22 110.2 90 58.9
Thhalv10024360m.g Eutrema salsugineum HOM05D001758 ORTHO05D004430 3.3e-22 110.2 90 57.8
Sp7g21360 Schrenkiella parvula HOM05D001758 ORTHO05D004430 3.3e-22 110.2 90 57.8
Hund14840 Selenicereus undatus HOM05D001758 ORTHO05D004430 3.3e-22 110.2 76 68.4
AL7G30000 Arabidopsis lyrata HOM05D001758 ORTHO05D004430 4.4e-22 109.8 90 56.7
ECA233G5934 Erigeron canadensis HOM05D001758 ORTHO05D004430 4.4e-22 109.8 90 57.8
ECA240G1636 Erigeron canadensis HOM05D001758 ORTHO05D004430 4.4e-22 109.8 91 57.1
HanXRQChr13g0394171 Helianthus annuus HOM05D001758 ORTHO05D004430 4.4e-22 109.8 91 56.0
Lsat_1_v5_gn_3_6140 Lactuca sativa HOM05D001758 ORTHO05D004430 4.4e-22 109.8 75 66.7
PSO675G0536 Papaver somniferum HOM05D001758 ORTHO05D004430 4.4e-22 109.8 91 59.3
C07p52720 Brassica napus HOM05D001758 ORTHO05D004430 5.7e-22 109.4 90 57.8
PSO541G5667 Papaver somniferum HOM05D001758 ORTHO05D004430 5.7e-22 109.4 91 59.3
AUR62027253 Chenopodium quinoa HOM05D001758 ORTHO05D004430 1.3e-21 108.2 76 65.8
AUR62010715 Chenopodium quinoa HOM05D001758 ORTHO05D004430 1.7e-21 107.8 76 65.8
Actinidia14582 Actinidia chinensis HOM05D001758 ORTHO05D004430 2.2e-21 107.5 86 60.5
Aa31LG6G6650 Aethionema arabicum HOM05D001758 ORTHO05D004430 2.8e-21 107.1 78 62.8
EL10Ac5g12803 Beta vulgaris HOM05D001758 ORTHO05D004430 2.8e-21 107.1 86 58.1
Zm00001eb017130 Zea mays HOM05D001758 ORTHO05D004430 4.8e-21 106.3 96 55.2
Zm00001eb394540 Zea mays HOM05D001758 ORTHO05D004430 4.8e-21 106.3 96 55.2
Lsat_1_v5_gn_6_5441 Lactuca sativa HOM05D001758 ORTHO05D004430 6.3e-21 105.9 76 61.8
MBI07_g21076_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 6.3e-21 105.9 76 63.2
Sp6g06070 Schrenkiella parvula HOM05D001758 ORTHO05D004430 1.8e-20 104.4 90 54.4
CARHR255190 Cardamine hirsuta HOM05D001758 ORTHO05D004430 4.1e-20 103.2 90 54.4
GSVIVG01019391001 Vitis vinifera HOM05D001758 ORTHO05D004430 4.1e-20 103.2 97 57.7
unitig_62.g23540 Utricularia gibba HOM05D001758 ORTHO05D017200 7.0e-20 102.4 86 59.3
Nn6g31920 Nelumbo nucifera HOM05D001758 ORTHO05D004430 1.2e-19 101.7 91 57.1
BcaB01g01638 Brassica carinata HOM05D001758 ORTHO05D004430 1.6e-19 101.3 90 52.2
Carub.0006s3029 Capsella rubella HOM05D001758 ORTHO05D004430 1.6e-19 101.3 90 54.4
HPP92_008911 Vanilla planifolia HOM05D001758 ORTHO05D004430 2.0e-19 100.9 76 59.2
ATR0329G044 Amborella trichopoda HOM05D001758 ORTHO05D004430 2.6e-19 100.5 76 60.5
AT4G11380 Arabidopsis thaliana HOM05D001758 ORTHO05D004430 2.6e-19 100.5 78 60.3
Thhalv10028407m.g Eutrema salsugineum HOM05D001758 ORTHO05D004430 2.6e-19 100.5 78 57.7
MBI10_g48303_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 3.5e-19 100.1 91 52.7
CDE02G4367 Ceratophyllum demersum HOM05D001758 ORTHO05D004430 1.7e-18 97.8 74 59.5
A09p27770 Brassica napus HOM05D001758 ORTHO05D004430 2.2e-18 97.4 90 51.1
BraA09t38347Z Brassica rapa HOM05D001758 ORTHO05D004430 2.2e-18 97.4 90 51.1
AL6G45790 Arabidopsis lyrata HOM05D001758 ORTHO05D004430 2.9e-18 97.1 90 52.2
BcaC04g21134 Brassica carinata HOM05D001758 ORTHO05D004430 1.5e-17 94.7 90 48.9
C09p35180 Brassica napus HOM05D001758 ORTHO05D004430 1.5e-17 94.7 90 48.9
BolC9t56364H Brassica oleracea HOM05D001758 ORTHO05D004430 1.5e-17 94.7 90 48.9
SEGI_36929 Sequoiadendron giganteum HOM05D001758 ORTHO05D004430 2.5e-17 94.0 76 59.2
AagrBONN_evm.TU.Sc2ySwM_117.2557 Anthoceros agrestis HOM05D001758 ORTHO05D004430 4.2e-17 93.2 91 51.6
Aqoxy5G01113 Aquilegia oxysepala HOM05D001758 ORTHO05D004430 5.5e-17 92.8 91 50.5
Mapoly0002s0295 Marchantia polymorpha HOM05D001758 ORTHO05D004430 1.6e-16 91.3 91 50.5
Pp3c14_2460 Physcomitrium patens HOM05D001758 ORTHO05D004430 8.0e-16 89.0 91 48.4
Pp3c2_18140 Physcomitrium patens HOM05D001758 ORTHO05D004430 1.0e-15 88.6 78 52.6
SMO298G0016 Selaginella moellendorffii HOM05D001758 ORTHO05D004430 4.0e-15 86.7 78 51.3
HanXRQChr05g0145951 Helianthus annuus HOM05D001758 ORTHO05D017200 1.2e-14 85.1 70 57.1
HanXRQChr16g0516131 Helianthus annuus HOM05D001758 ORTHO05D017200 9.7e-14 82.0 70 55.7
Pp3c1_19340 Physcomitrium patens HOM05D001758 ORTHO05D004430 9.7e-14 82.0 78 50.0
CBR_g10902 Chara braunii HOM05D001758 ORTHO05D004430 1.7e-13 81.3 93 45.2
DCAR_005564 Daucus carota HOM05D001758 ORTHO05D004430 3.1e-12 77.0 69 53.6
VMungo0464G0353 Vigna mungo HOM05D028071 ORTHO05D437302 1.7e-10 71.2 54 66.7
VMungo0464G1358 Vigna mungo HOM05D000107 ORTHO05D000062 3.2e-09 67.0 54 64.8
VMungo0331G1318 Vigna mungo HOM05D010369 ORTHO05D018140 4.2e-09 66.6 104 42.3
Lj2A182G27 Lonicera japonica HOM05D001758 ORTHO05D017200 7.2e-09 65.9 45 66.7
VMungo0442G0001 Vigna mungo HOM05D000632 ORTHO05D435234 6.1e-08 62.8 52 61.5
Actinidia27143 Actinidia chinensis HOM05D001758 ORTHO05D017200 1.0e-07 62.0 93 41.9
VMungo0647G2218 Vigna mungo HOM05D028071 ORTHO05D434806 3.0e-07 60.5 45 66.7
VMungo0720G0498 Vigna mungo HOM05D010369 ORTHO05D018140 5.2e-07 59.7 46 67.4
BcaNung04479 Brassica carinata HOM05D001758 ORTHO05D017200 1.5e-06 58.2 52 55.8
VMungo1080G0712 Vigna mungo HOM05D029819 ORTHO05D018140 2.0e-06 57.8 83 50.6


User provided reference genes

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