Gene: vmacro13146
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro13146
- Transcript Identifier vmacro13146-RA
- Gene Type Coding gene
- Location chr7_Vaccinium_macrocarpon_Stevens_v1 : 1599782-1608294 : negative
Gene Family Information
- ID HOM05D001758
- #Genes/#Species 369/100
- Phylogenetic origin
- ID ORTHO05D004430
- #Genes/#Species 181/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro13146_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to BETAC-AD: Beta-adaptin-like protein C (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0015031 | ISO | PLAZA Homology (enrichment) | protein transport | HOM05D001758 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030276 | ISO | PLAZA Homology (enrichment) | clathrin binding | HOM05D001758 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030117 | IEA | InterPro | membrane coat | |
| GO:0030131 | IEA | InterPro | clathrin adaptor complex | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G23460 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G23460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016024 | Armadillo-type fold |
| IPR002553 | Clathrin/coatomer adaptor, adaptin-like, N-terminal |
| IPR013041 | Clathrin adaptor, appendage, Ig-like subdomain superfamily |
| IPR015151 | Beta-adaptin appendage, C-terminal subdomain |
| IPR013037 | Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain |
| IPR009028 | Coatomer/calthrin adaptor appendage, C-terminal subdomain |
| IPR012295 | TBP domain superfamily |
| IPR011989 | Armadillo-like helical |
| IPR026739 | AP complex subunit beta |
| Mapman id | Description |
|---|---|
| 22.3.1.2.2 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.large subunit beta (AP1/2B) |
| 22.3.1.3.2 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.large subunit beta (AP1/2B) |