Gene: Solyc08g081320.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g081320.3
- Transcript Identifier Solyc08g081320.3.1
- Gene Type Coding gene
- Location SL4.0ch08 : 62505400-62513465 : negative
Gene Family Information
- ID HOM05D001758
- #Genes/#Species 369/100
- Phylogenetic origin
- ID ORTHO05D004430
- #Genes/#Species 181/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc08g081320.3.1
- uniprot A0A3Q7HW92
- gene_id Solyc08g081320
Descriptions
- Description Beta-adaptin-like protein (AHRD V3.3 *** A0A2G2XJQ8_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0015031 | IEA | InterPro | protein transport | |
| GO:0006886 | IEA | GOA Database | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IBA IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030276 | IEA | GOA Database | clathrin binding | |
| GO:0030276 | IEA | InterPro | clathrin binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030117 | IEA | GOA Database | membrane coat | |
| GO:0030117 | IEA | InterPro | membrane coat | |
| GO:0030131 | IEA | GOA Database | clathrin adaptor complex | |
| GO:0030131 | IEA | InterPro | clathrin adaptor complex | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G23460 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G23460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016342 | AP-1/2/4 complex subunit beta |
| IPR012295 | TBP domain superfamily |
| IPR002553 | Clathrin/coatomer adaptor, adaptin-like, N-terminal |
| IPR013041 | Clathrin adaptor, appendage, Ig-like subdomain superfamily |
| IPR015151 | Beta-adaptin appendage, C-terminal subdomain |
| IPR009028 | Coatomer/calthrin adaptor appendage, C-terminal subdomain |
| IPR016024 | Armadillo-type fold |
| IPR011989 | Armadillo-like helical |
| IPR008152 | Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain |
| IPR013037 | Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain |
| IPR026739 | AP complex subunit beta |
| Mapman id | Description |
|---|---|
| 22.3.1.2.2 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.large subunit beta (AP1/2B) |
| 22.3.1.3.2 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.large subunit beta (AP1/2B) |