Gene: Sopen08g029630

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g029630
  • Transcript Identifier Sopen08g029630.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 68951886-68960026 : negative

Gene Family Information

  • ID HOM05D001758
  • #Genes/#Species 369/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g029630.1

Descriptions

  • Description Adaptin family protein | FUNCTIONS IN: protein transporter activity, clathrin binding, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain , Armadillo-like helical , Clathrin/coatomer adaptor, adaptin-like, N-terminal , Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain , Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain , Beta2-adaptin/TATA-box binding, C-terminal , Armadillo-type fold , Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain , Adaptor protein complex, beta subunit , Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain | BEST Arabidopsis thaliana protein match is: Adaptin family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
InterProprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030276
IEA
InterProclathrin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030117
IEA
InterPromembrane coat
GO:0030131
IEA
InterProclathrin adaptor complex
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G23460
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G23460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012295 TBP domain superfamily
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR013041 Clathrin adaptor, appendage, Ig-like subdomain superfamily
IPR015151 Beta-adaptin appendage, C-terminal subdomain
IPR009028 Coatomer/calthrin adaptor appendage, C-terminal subdomain
IPR016024 Armadillo-type fold
IPR016342 AP-1/2/4 complex subunit beta
IPR011989 Armadillo-like helical
IPR008152 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
IPR013037 Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain
IPR026739 AP complex subunit beta
Mapman id Description
22.3.1.2.2 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.large subunit beta (AP1/2B)
22.3.1.3.2 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.large subunit beta (AP1/2B)