Gene: AT4G11380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G11380
  • Transcript Identifier AT4G11380.1
  • Gene Type Coding gene
  • Location Chr4 : 6920608-6925444 : positive

Gene Family Information

  • ID HOM05D001758
  • #Genes/#Species 369/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G11380.1
  • uniprot Q9SUS3

Descriptions

  • Description Adaptin family protein
  • Computational description Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1); Has 3548 Blast hits to 3463 proteins in 290 species: Archae - 10; Bacteria - 21; Metazoa - 1495; Fungi - 876; Plants - 441; Viruses - 0; Other Eukaryotes - 705 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0016192
IBA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
Gene Ontologyvesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
Gene Ontologyintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030276
IEA
Gene Ontologyclathrin binding
GO:0030276
IEA
InterProclathrin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0030117
IEA
GOA Databasemembrane coat
GO:0030117
IEA
InterPromembrane coat
GO:0030131
IEA
Gene Ontologyclathrin adaptor complex
GO:0030131
IEA
InterProclathrin adaptor complex
GO:0005634
ISM
Gene Ontologynucleus
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0030665
IEA
GOA Databaseclathrin-coated vesicle membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005829
HDA
RCA
Gene Ontologycytosol1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR008152 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
IPR015151 Beta-adaptin appendage, C-terminal subdomain
IPR013041 Clathrin adaptor, appendage, Ig-like subdomain superfamily
IPR013037 Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain
IPR016024 Armadillo-type fold
IPR012295 TBP domain superfamily
IPR026739 AP complex subunit beta
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR009028 Coatomer/calthrin adaptor appendage, C-terminal subdomain
IPR016342 AP-1/2/4 complex subunit beta
Mapman id Description
22.3.1.2.2 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.large subunit beta (AP1/2B)
22.3.1.3.2 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.large subunit beta (AP1/2B)