Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 1.7e-296 1021.9 520 100.0
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 2.1e-174 616.3 526 62.4
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 9.6e-167 590.9 523 61.0
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.6e-166 590.1 525 60.0
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 1.7e-163 580.1 521 60.1
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 1.6e-158 563.5 544 58.8
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 5.0e-155 552.0 528 56.2
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 9.7e-151 537.7 529 59.2
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 2.8e-150 536.2 552 55.4
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 8.2e-150 534.6 532 56.4
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 4.1e-149 532.3 570 53.0
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 3.4e-148 529.3 596 51.5
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 1.7e-147 526.9 525 57.0
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 1.9e-146 523.5 523 56.0
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 1.9e-146 523.5 706 45.9
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 1.6e-145 520.4 556 52.5
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 2.1e-145 520.0 556 53.2
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 6.1e-145 518.5 528 52.5
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 1.4e-144 517.3 575 50.3
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 5.1e-144 515.4 526 54.8
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 1.5e-143 513.8 560 51.6
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 1.5e-143 513.8 549 52.1
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 3.3e-143 512.7 573 50.4
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 9.7e-143 511.1 549 52.1
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 4.8e-142 508.8 553 52.6
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 2.4e-141 506.5 552 51.6
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 9.1e-141 504.6 561 49.7
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 1.2e-140 504.2 569 51.3
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 2.0e-140 503.4 568 50.2
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 2.6e-140 503.1 541 53.0
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 1.0e-139 501.1 538 52.6
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.8e-139 499.2 507 54.8
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 5.0e-139 498.8 561 50.8
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 2.5e-138 496.5 526 52.5
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 1.6e-137 493.8 560 50.7
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 2.1e-137 493.4 539 51.6
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.0e-136 491.1 582 48.6
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.4e-136 490.7 556 49.3
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 2.0e-135 486.9 569 49.4
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 2.2e-134 483.4 540 51.9
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 4.8e-134 482.3 553 49.2
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 6.3e-134 481.9 545 50.1
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 2.4e-133 479.9 581 48.9
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 2.2e-131 473.4 529 50.5
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 2.9e-131 473.0 545 49.4
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 1.1e-130 471.1 545 49.5
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.5e-130 470.7 577 49.2
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 4.2e-130 469.2 531 50.7
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 4.2e-130 469.2 562 47.7
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 1.2e-129 467.6 530 50.2
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 8.0e-129 464.9 548 48.5
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 1.0e-128 464.5 546 48.2
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 4.4e-127 459.1 561 47.6
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 2.8e-126 456.4 549 47.9
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.1e-125 454.5 534 48.5
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 2.0e-124 450.3 562 47.0
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 1.3e-123 447.6 562 46.1
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 2.2e-123 446.8 531 49.3
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 2.2e-123 446.8 586 45.4
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 2.9e-123 446.4 474 54.9
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 6.5e-123 445.3 548 45.3
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 6.5e-123 445.3 537 48.2
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 2.5e-122 443.4 541 49.5
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 6.1e-121 438.7 518 49.6
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 1.8e-120 437.2 546 45.6
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 4.0e-120 436.0 549 45.5
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 7.5e-119 431.8 519 48.7
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 9.8e-119 431.4 619 44.4
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 8.3e-118 428.3 454 54.6
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 2.4e-117 426.8 508 48.2
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 1.7e-115 420.6 590 43.1
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 2.9e-115 419.9 534 46.6
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 3.8e-115 419.5 535 46.0
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 3.8e-115 419.5 552 44.9
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 2.1e-113 413.7 546 43.6
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 2.1e-113 413.7 543 45.5
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 2.6e-111 406.8 543 44.9
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 1.3e-110 404.4 550 44.0
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 1.1e-109 401.4 579 43.9
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 1.9e-106 390.6 508 46.9
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 7.3e-106 388.7 525 44.8
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 2.8e-105 386.7 566 43.6
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 2.8e-105 386.7 457 49.7
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.6e-100 370.9 493 45.2
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 8.1e-97 358.6 476 47.7
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 3.4e-95 353.2 561 39.2
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 4.1e-93 346.3 471 43.3
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 1.1e-88 331.6 550 40.2
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 7.6e-87 325.5 558 38.4
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 3.7e-86 323.2 333 50.2
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 4.1e-85 319.7 443 43.8
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 6.2e-81 305.8 413 45.3
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.9e-78 297.0 385 47.0
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 3.6e-73 280.0 496 40.1
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.6e-73 280.0 594 34.0
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 7.6e-71 272.3 470 38.9
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.2e-68 265.0 440 39.3
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 5.6e-66 256.1 209 63.6
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 1.8e-64 251.1 364 44.0
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.4e-63 246.9 421 39.2
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 7.6e-63 245.7 539 34.7
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 5.6e-58 229.6 194 59.8
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.3e-57 228.4 148 73.0
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 4.8e-57 226.5 148 73.0
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 2.4e-56 224.2 354 42.4
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 3.8e-54 216.9 211 55.0
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 4.2e-53 213.4 312 46.8
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 2.6e-47 194.1 138 68.8
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.9e-43 180.3 119 74.8
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 9.4e-37 159.1 588 28.4
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 2.0e-34 151.4 216 48.6
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 4.8e-33 146.7 120 60.8
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 8.8e-27 125.9 360 28.9
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 7.4e-26 122.9 151 45.0
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.2e-17 94.7 58 81.0
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.7e-14 85.1 73 57.5
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 2.5e-13 81.3 88 53.4
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 2.1e-12 78.2 192 32.3
Dinv24123 Davidia involucrata HOM05D006560 ORTHO05D008164 2.7e-07 61.2 30 83.3


User provided reference genes

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