Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 0.0e+00 1711.8 902 100.0
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 0.0e+00 1415.6 900 84.6
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 9.8e-284 980.3 976 57.9
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 1.0e-277 960.3 901 59.6
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 5.4e-274 948.0 975 55.3
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 7.8e-273 944.1 972 54.7
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 4.3e-271 938.3 894 58.6
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 1.4e-266 923.3 946 54.9
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 2.4e-266 922.5 941 56.3
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 1.7e-264 916.4 946 54.8
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 8.6e-264 914.1 1026 52.0
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 6.4e-259 897.9 847 57.3
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 5.1e-256 888.3 933 55.0
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 6.6e-256 887.9 952 54.1
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 8.1e-254 880.9 961 52.2
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 1.2e-252 877.1 949 52.6
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 3.4e-252 875.5 870 55.3
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 3.2e-250 869.0 857 56.8
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 4.2e-250 868.6 981 51.6
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 2.1e-249 866.3 930 54.5
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 1.0e-248 864.0 900 54.7
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 1.6e-246 856.7 855 56.0
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 2.1e-246 856.3 912 52.0
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 1.4e-245 853.6 913 51.9
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 2.4e-245 852.8 924 51.8
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 6.9e-245 851.3 913 51.5
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 9.0e-245 850.9 935 52.0
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 4.4e-244 848.6 855 55.9
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 7.6e-244 847.8 941 52.6
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 2.1e-241 839.7 966 51.3
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 2.7e-241 839.3 939 51.9
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 2.7e-241 839.3 952 49.9
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 7.9e-241 837.8 925 51.6
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 3.9e-240 835.5 948 50.1
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 1.9e-239 833.2 933 50.9
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 3.3e-239 832.4 958 50.3
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 1.6e-238 830.1 920 52.9
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 4.8e-238 828.6 918 51.7
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 6.2e-238 828.2 900 54.1
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 1.4e-237 827.0 969 51.4
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 5.8e-236 821.6 912 51.3
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 5.8e-236 821.6 901 51.5
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 1.7e-235 820.1 862 53.2
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 8.4e-235 817.8 944 50.6
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 1.9e-234 816.6 970 48.6
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 3.2e-234 815.8 913 51.5
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.2e-233 813.9 980 50.6
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 1.8e-232 810.1 880 51.1
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 1.1e-231 807.4 927 49.7
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 8.1e-230 801.2 952 48.9
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 1.4e-229 800.4 928 50.1
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.4e-229 800.4 1003 49.1
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 1.4e-229 800.4 919 50.8
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 1.5e-228 797.0 927 50.2
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 3.4e-228 795.8 857 51.9
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 5.8e-228 795.0 937 49.9
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 1.3e-227 793.9 878 50.8
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 1.6e-225 786.9 983 47.6
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 1.0e-224 784.3 912 51.3
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 1.1e-223 780.8 873 49.8
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 1.9e-223 780.0 968 47.8
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 1.4e-221 773.9 894 49.7
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 1.5e-220 770.4 825 53.1
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 2.0e-220 770.0 823 52.7
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 1.0e-219 767.7 821 51.9
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 6.5e-219 765.0 901 49.2
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 4.2e-218 762.3 865 50.1
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 5.1e-216 755.4 971 46.8
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 4.8e-214 748.8 841 49.8
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 1.1e-213 747.7 919 47.1
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 1.4e-213 747.3 922 46.9
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 2.4e-213 746.5 910 46.9
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 3.1e-213 746.1 921 48.1
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 6.9e-213 745.0 820 50.9
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 1.2e-212 744.2 922 46.6
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 1.2e-212 744.2 735 55.6
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 5.9e-212 741.9 972 45.3
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 7.7e-212 741.5 914 47.2
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 5.5e-210 735.3 922 47.3
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 9.4e-210 734.6 961 46.6
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 8.8e-208 728.0 914 46.2
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 1.1e-207 727.6 937 45.9
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 2.0e-207 726.9 914 46.2
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 3.8e-203 712.6 883 47.7
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 6.1e-201 705.3 828 48.7
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 3.9e-200 702.6 720 53.3
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 1.1e-199 701.0 940 44.1
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 2.4e-197 693.3 845 51.2
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 2.1e-193 680.2 862 46.3
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 1.5e-191 674.1 858 45.8
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 1.3e-190 671.0 683 52.7
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 3.1e-189 666.4 867 45.9
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 1.5e-186 657.5 852 45.3
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 2.7e-185 653.3 879 44.3
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 9.8e-183 644.8 699 53.6
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 4.5e-172 609.4 864 43.5
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 1.2e-169 601.3 712 50.1
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 8.0e-169 598.6 950 40.9
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 1.4e-165 587.8 698 48.7
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 4.6e-164 582.8 668 48.1
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 2.3e-160 570.5 626 50.0
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 1.4e-144 518.1 939 37.4
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 5.8e-143 512.7 831 39.7
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 8.4e-142 508.8 851 39.8
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 7.3e-130 469.2 973 34.9
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 2.8e-129 467.2 478 52.9
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 1.2e-116 425.2 844 35.4
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 1.5e-98 365.2 1115 28.3
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 9.1e-96 355.9 255 67.5
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 1.9e-61 241.9 890 27.8
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 6.4e-49 200.3 463 30.9
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 4.3e-45 187.6 377 34.0
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 1.2e-44 186.0 384 31.8
Peaxi162Scf00305g00615 Petunia axillaris HOM05D006375 ORTHO05D008188 4.3e-37 161.0 261 43.3
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 4.3e-29 134.4 372 28.5
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 2.9e-25 121.7 292 29.5
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 1.0e-22 113.2 75 66.7
CAN.G222.26 Capsicum annuum HOM05D006375 ORTHO05D008188 2.4e-19 102.1 184 40.8
FAN26G2035 Fragaria x ananassa HOM05D006375 ORTHO05D008188 9.0e-19 100.1 174 41.4
COL.COLO4_05996 Corchorus olitorius HOM05D006375 ORTHO05D000012 5.8e-18 97.4 108 51.9
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 7.6e-18 97.1 173 27.2
SHI25356 Sapria himalayana HOM05D006375 ORTHO05D008188 2.4e-16 92.0 85 58.8
GSVIVG01023078001 Vitis vinifera HOM05D000241 ORTHO05D440677 5.1e-06 57.8 44 56.8


User provided reference genes

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