Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.7e-136 487.6 258 100.0
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.7e-136 487.6 258 100.0
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 3.1e-97 359.0 256 69.9
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 6.8e-97 357.8 257 71.6
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 3.4e-96 355.5 257 71.2
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 7.5e-96 354.4 260 71.2
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 1.3e-95 353.6 264 71.6
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 1.4e-94 350.1 263 68.8
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.4e-94 349.4 258 68.2
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.2e-93 347.1 254 68.9
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 3.5e-93 345.5 252 69.8
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 4.6e-93 345.1 256 70.7
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 6.0e-93 344.7 256 66.0
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 6.0e-93 344.7 261 69.0
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.7e-92 343.2 255 69.4
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.3e-92 342.8 256 69.1
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 2.3e-92 342.8 256 69.1
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.0e-92 342.4 256 69.1
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 5.1e-92 341.7 258 69.0
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 8.6e-92 340.9 244 70.9
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 1.1e-91 340.5 260 69.6
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.2e-90 337.0 221 76.5
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.8e-90 335.9 256 67.2
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 2.3e-89 332.8 221 76.0
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.1e-89 332.4 241 68.9
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 5.2e-89 331.6 256 70.7
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 6.8e-89 331.3 250 70.0
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.5e-88 330.1 250 69.2
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 4.4e-88 328.6 258 65.1
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 4.4e-88 328.6 256 65.2
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.8e-88 328.2 256 65.2
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 2.2e-87 326.2 224 73.7
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 2.2e-87 326.2 264 65.2
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.9e-87 325.9 260 63.1
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 6.4e-87 324.7 223 73.5
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 8.4e-87 324.3 256 66.0
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.1e-86 323.9 260 62.7
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.4e-86 323.6 256 64.1
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 2.4e-86 322.8 255 65.1
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 2.4e-86 322.8 258 64.3
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 4.1e-86 322.0 286 60.1
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.1e-85 319.7 256 63.3
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 3.5e-85 318.9 261 62.1
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 7.8e-85 317.8 262 64.5
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 1.0e-84 317.4 261 62.1
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.7e-84 316.6 228 70.6
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.7e-84 316.6 258 64.0
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 2.3e-84 316.2 251 64.1
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 3.3e-83 312.4 256 63.7
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 7.3e-83 311.2 256 63.7
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.6e-82 310.1 262 62.2
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.6e-82 310.1 253 62.8
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 2.8e-82 309.3 255 63.1
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 2.8e-82 309.3 253 63.6
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 2.8e-82 309.3 349 51.0
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 4.7e-82 308.5 225 68.0
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.1e-81 307.4 252 64.3
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 1.8e-81 306.6 251 65.7
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.4e-81 306.2 282 58.5
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 4.0e-81 305.4 258 61.2
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 4.0e-81 305.4 224 66.5
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 4.0e-81 305.4 253 68.8
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 6.8e-81 304.7 274 58.4
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 8.9e-81 304.3 229 67.2
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.2e-80 303.9 252 62.3
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 3.4e-80 302.4 214 68.7
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 9.9e-80 300.8 252 61.9
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 1.1e-78 297.4 242 63.2
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.4e-78 297.0 229 65.1
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 4.2e-78 295.4 252 61.1
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 9.3e-78 294.3 235 64.7
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 1.2e-77 293.9 306 53.9
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 2.7e-77 292.7 239 62.3
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.7e-77 292.7 252 61.9
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 6.0e-77 291.6 260 60.0
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.0e-76 290.8 249 63.5
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 3.0e-76 289.3 225 63.6
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 3.3e-75 285.8 203 66.0
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 1.3e-74 283.9 255 59.2
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.1e-74 283.1 286 57.0
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 1.4e-73 280.4 258 58.1
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 4.0e-73 278.9 225 59.1
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 5.3e-73 278.5 268 59.3
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 2.6e-72 276.2 205 65.4
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 2.6e-72 276.2 205 65.4
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 2.9e-71 272.7 256 56.6
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 3.2e-70 269.2 239 58.6
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 4.2e-70 268.9 267 54.3
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 9.3e-70 267.7 257 54.1
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 3.0e-68 262.7 257 54.5
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 1.1e-67 260.8 263 55.9
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 3.3e-67 259.2 176 68.8
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 2.1e-66 256.5 279 53.0
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 2.4e-65 253.1 259 52.9
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.6e-64 249.6 254 53.9
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 7.9e-61 238.0 448 36.8
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.5e-59 233.8 225 58.2
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 4.3e-59 232.3 259 52.1
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 6.0e-53 211.8 135 70.4
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 1.9e-51 206.8 159 62.9
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 3.3e-51 206.1 259 47.1
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.9e-43 180.3 227 41.0
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 2.3e-36 156.8 259 40.5
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 3.0e-36 156.4 219 40.2
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.9e-36 156.0 149 57.7
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 2.6e-32 143.3 90 71.1
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.9e-31 139.8 98 65.3
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.8e-31 139.4 136 51.5
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.8e-28 130.6 122 62.3
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.2e-24 117.9 217 33.2
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 4.0e-20 102.8 88 52.3
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 5.2e-20 102.4 131 46.6
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.1e-19 101.3 231 30.3
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 3.3e-19 99.8 165 39.4
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 4.8e-18 95.9 121 57.0
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 8.2e-18 95.1 88 59.1
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 9.1e-17 91.7 133 48.1
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 6.1e-13 79.0 96 50.0
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.5e-11 74.3 86 50.0
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 5.7e-11 72.4 53 58.5
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 2.8e-10 70.1 155 28.4
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 4.1e-09 66.2 159 30.8
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 2.9e-07 60.1 140 28.6


User provided reference genes

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