Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 2.9e-71 272.3 176 100.0
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 7.9e-61 237.7 183 89.1
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 3.7e-58 228.8 176 89.2
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 2.4e-57 226.1 176 85.2
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 2.4e-57 226.1 174 87.9
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 2.4e-57 226.1 177 80.8
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 5.3e-57 224.9 175 88.6
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 9.0e-57 224.2 176 85.2
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 9.0e-57 224.2 176 86.9
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 9.0e-57 224.2 173 88.4
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 9.0e-57 224.2 179 85.5
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 2.6e-56 222.6 176 76.1
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 7.6e-56 221.1 158 83.5
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 1.0e-55 220.7 172 79.7
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 2.2e-55 219.5 179 82.7
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 2.2e-55 219.5 173 88.4
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 2.9e-55 219.2 156 75.6
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 5.0e-55 218.4 176 84.1
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 6.5e-55 218.0 172 86.0
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 6.5e-55 218.0 149 90.6
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 6.5e-55 218.0 155 85.2
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 8.4e-55 217.6 160 85.6
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.4e-54 216.9 154 78.6
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 3.2e-54 215.7 177 79.7
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 3.2e-54 215.7 176 78.4
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 5.5e-54 214.9 149 89.9
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 7.2e-54 214.5 158 83.5
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 7.2e-54 214.5 158 83.5
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 7.2e-54 214.5 181 72.4
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 1.2e-53 213.8 177 78.0
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 1.2e-53 213.8 158 82.9
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 1.2e-53 213.8 155 79.4
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 1.2e-53 213.8 155 79.4
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 2.1e-53 213.0 176 84.7
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 2.1e-53 213.0 174 85.6
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 2.1e-53 213.0 174 85.6
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 2.7e-53 212.6 155 78.7
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 3.5e-53 212.2 154 85.1
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 3.5e-53 212.2 158 82.9
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 4.6e-53 211.8 178 75.8
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 4.6e-53 211.8 173 85.0
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 7.9e-53 211.1 179 80.4
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 7.9e-53 211.1 155 80.0
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 7.9e-53 211.1 153 83.7
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 1.0e-52 210.7 154 81.8
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.3e-52 210.3 146 87.7
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 1.3e-52 210.3 146 87.7
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 1.3e-52 210.3 178 83.1
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 1.8e-52 209.9 177 77.4
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 1.8e-52 209.9 175 76.6
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 2.3e-52 209.5 154 82.5
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 2.3e-52 209.5 154 77.3
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 3.0e-52 209.1 142 90.1
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 3.0e-52 209.1 158 81.0
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 3.0e-52 209.1 154 81.8
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 3.9e-52 208.8 146 87.0
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 5.1e-52 208.4 142 83.8
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 6.7e-52 208.0 179 81.6
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 8.7e-52 207.6 141 91.5
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 8.7e-52 207.6 151 80.1
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 1.1e-51 207.2 172 83.1
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 1.1e-51 207.2 173 78.6
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 2.5e-51 206.1 173 76.3
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 3.3e-51 205.7 179 66.5
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 3.3e-51 205.7 176 77.3
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 3.3e-51 205.7 178 84.3
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 3.3e-51 205.7 151 78.1
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 4.3e-51 205.3 179 75.4
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 4.3e-51 205.3 156 85.3
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 4.3e-51 205.3 151 81.5
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 5.7e-51 204.9 154 84.4
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 7.4e-51 204.5 183 78.1
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 7.4e-51 204.5 179 82.1
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 9.7e-51 204.1 182 77.5
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 1.3e-50 203.8 179 77.1
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 1.3e-50 203.8 179 77.1
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 1.3e-50 203.8 181 77.9
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 1.3e-50 203.8 153 73.9
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 1.3e-50 203.8 176 77.8
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 1.3e-50 203.8 154 72.1
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 1.3e-50 203.8 156 80.8
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 2.8e-50 202.6 177 79.1
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 2.8e-50 202.6 158 79.7
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 3.7e-50 202.2 134 83.6
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 3.7e-50 202.2 155 80.6
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 4.8e-50 201.8 155 82.6
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 6.3e-50 201.4 144 79.2
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 6.3e-50 201.4 154 83.8
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 1.1e-49 200.7 181 75.7
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 1.1e-49 200.7 179 76.0
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 1.4e-49 200.3 178 72.5
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 1.4e-49 200.3 178 72.5
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 1.8e-49 199.9 154 79.2
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 1.8e-49 199.9 154 79.2
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 1.8e-49 199.9 147 85.7
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 2.4e-49 199.5 160 82.5
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 2.4e-49 199.5 153 77.8
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 3.1e-49 199.1 148 86.5
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 3.1e-49 199.1 148 86.5
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 3.1e-49 199.1 152 80.9
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 3.1e-49 199.1 185 76.8
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 3.1e-49 199.1 177 81.9
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 4.1e-49 198.7 155 81.9
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 4.1e-49 198.7 155 81.9
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 4.1e-49 198.7 155 81.9
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 4.1e-49 198.7 178 80.3
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 4.1e-49 198.7 151 82.8
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 4.1e-49 198.7 176 80.7
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 6.9e-49 198.0 146 84.2
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 9.0e-49 197.6 176 81.8
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 9.0e-49 197.6 179 74.3
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.2e-48 197.2 158 82.9
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 1.2e-48 197.2 143 86.0
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 1.5e-48 196.8 178 71.9
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 2.0e-48 196.4 155 81.3
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 2.0e-48 196.4 145 84.1
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 4.5e-48 195.3 152 74.3
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 7.7e-48 194.5 153 82.4
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 7.7e-48 194.5 154 79.2
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.0e-47 194.1 154 73.4
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 1.0e-47 194.1 154 74.7
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 1.0e-47 194.1 178 70.2
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 1.0e-47 194.1 180 80.6
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 1.3e-47 193.7 153 79.1
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 1.7e-47 193.4 150 82.0
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 3.8e-47 192.2 155 81.3
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 5.0e-47 191.8 157 78.3
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 8.5e-47 191.0 142 88.0
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 8.5e-47 191.0 142 88.0
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 1.4e-46 190.3 156 81.4
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 1.4e-46 190.3 156 75.0
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 1.9e-46 189.9 151 77.5
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 2.5e-46 189.5 187 68.4
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 4.2e-46 188.7 178 77.5
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 5.5e-46 188.3 154 73.4
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 5.5e-46 188.3 183 76.0
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 7.2e-46 188.0 158 75.3
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 2.1e-45 186.4 148 79.1
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 7.9e-45 184.5 150 78.7
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 1.4e-44 183.7 155 76.1
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 6.7e-44 181.4 91 92.3
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 8.8e-44 181.0 109 78.0
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 1.5e-43 180.3 148 79.1
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 3.3e-43 179.1 156 71.8
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 7.4e-43 177.9 95 89.5
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.7e-42 176.8 94 87.2
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 8.2e-42 174.5 90 91.1
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.5e-40 170.2 106 79.2
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 2.7e-37 159.5 81 88.9
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 1.4e-33 147.1 149 62.4
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 1.8e-33 146.7 127 62.2
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 1.8e-33 146.7 174 70.7
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 1.5e-30 137.1 80 76.2
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 1.8e-28 130.2 100 68.0
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 5.7e-27 125.2 60 95.0
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 2.8e-26 122.9 76 68.4
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 2.2e-23 113.2 89 83.1
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 3.8e-23 112.5 93 60.2
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 8.0e-21 104.8 94 50.0
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 1.0e-20 104.4 172 54.7
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 2.0e-19 100.1 108 54.6
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 9.8e-19 97.8 49 85.7
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 1.3e-18 97.4 108 53.7
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 2.6e-11 73.2 44 77.3
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 2.6e-11 73.2 44 77.3
BolC9t58722H Brassica oleracea HOM05D004151 ORTHO05D004775 2.6e-11 73.2 151 49.7
BcaB08g36698 Brassica carinata HOM05D004151 ORTHO05D004775 5.7e-11 72.0 46 78.3
Atru.chr13.534 Acer truncatum HOM05D004151 ORTHO05D004775 2.2e-10 70.1 44 75.0
Atru.chr2.3197 Acer truncatum HOM05D004151 ORTHO05D004775 2.2e-10 70.1 44 75.0
Atru.chr4.2011 Acer truncatum HOM05D004151 ORTHO05D004775 2.2e-10 70.1 44 75.0
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 2.8e-10 69.7 83 50.6
ECA246G0128 Erigeron canadensis HOM05D001659 ORTHO05D001659 6.6e-07 58.5 35 71.4


User provided reference genes

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