Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23158 Trifolium pratense HOM05D005655 ORTHO05D007386 1.3e-26 122.1 55 100.0
TPR.G7160 Trifolium pratense HOM05D005655 ORTHO05D007386 1.3e-26 122.1 55 100.0
Medtr1g097390 Medicago truncatula HOM05D005655 ORTHO05D007386 2.1e-24 114.8 55 92.7
Glyma.10G220000 Glycine max HOM05D005655 ORTHO05D007386 4.5e-22 107.1 55 85.5
Psat6g189760 Pisum sativum HOM05D005655 ORTHO05D007386 7.6e-22 106.3 55 83.6
arahy.Tifrunner.gnm1.ann1.3U6NKV Arachis hypogaea HOM05D005655 ORTHO05D007386 4.9e-21 103.6 54 83.3
arahy.Tifrunner.gnm1.ann1.A75B0U Arachis hypogaea HOM05D005655 ORTHO05D007386 4.9e-21 103.6 54 83.3
Lj5g0012902 Lotus japonicus HOM05D005655 ORTHO05D007386 8.4e-21 102.8 55 81.8
Lalb_Chr02g0141641 Lupinus albus HOM05D005655 ORTHO05D007386 1.1e-20 102.4 54 83.3
Actinidia17755 Actinidia chinensis HOM05D005655 ORTHO05D007386 1.4e-20 102.1 55 80.0
VMungo0720G1747 Vigna mungo HOM05D005655 ORTHO05D007386 1.4e-20 102.1 55 81.8
Atru.chr13.1965 Acer truncatum HOM05D005655 ORTHO05D007386 2.5e-20 101.3 54 79.6
Glyma.20G171700 Glycine max HOM05D005655 ORTHO05D007386 2.5e-20 101.3 55 81.8
Phvul.007G085300 Phaseolus vulgaris HOM05D005655 ORTHO05D007386 2.5e-20 101.3 55 80.0
QL02p036335 Quercus lobata HOM05D005655 ORTHO05D007386 3.2e-20 100.9 54 77.8
HanXRQChr04g0115611 Helianthus annuus HOM05D005655 ORTHO05D007386 4.2e-20 100.5 54 79.6
Ciclev10001190m.g Citrus clementina HOM05D005655 ORTHO05D007386 7.1e-20 99.8 54 75.9
Lsat_1_v5_gn_1_5920 Lactuca sativa HOM05D005655 ORTHO05D007386 9.3e-20 99.4 54 79.6
Lsat_1_v5_gn_1_5940 Lactuca sativa HOM05D005655 ORTHO05D007386 9.3e-20 99.4 54 79.6
SalBow6G4612 Salvia bowleyana HOM05D005655 ORTHO05D007386 9.3e-20 99.4 54 77.8
COL.COLO4_13720 Corchorus olitorius HOM05D005655 ORTHO05D007386 1.2e-19 99.0 55 76.4
Gohir.A02G061800 Gossypium hirsutum HOM05D005655 ORTHO05D007386 1.2e-19 99.0 54 77.8
Gohir.D02G067400 Gossypium hirsutum HOM05D005655 ORTHO05D007386 1.2e-19 99.0 54 77.8
Gorai.005G076300 Gossypium raimondii HOM05D005655 ORTHO05D007386 1.2e-19 99.0 54 77.8
CARHR033670 Cardamine hirsuta HOM05D005655 ORTHO05D007386 1.6e-19 98.6 54 75.9
Eucgr.F00074 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.1e-19 98.2 54 75.9
Eucgr.F02671 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.1e-19 98.2 54 75.9
Eucgr.J00222 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.1e-19 98.2 54 75.9
Eucgr.L00427 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.1e-19 98.2 54 75.9
CiPaw.15G011200 Carya illinoinensis HOM05D005655 ORTHO05D007386 2.7e-19 97.8 55 74.5
Lj7C387T6 Lonicera japonica HOM05D005655 ORTHO05D007386 2.7e-19 97.8 55 78.2
MSTRG.22119 Avicennia marina HOM05D005655 ORTHO05D007386 3.5e-19 97.4 54 75.9
Prupe.8G045000 Prunus persica HOM05D005655 ORTHO05D007386 4.6e-19 97.1 54 77.8
CANSAT25G2324 Cannabis sativa HOM05D005655 ORTHO05D007386 6.0e-19 96.7 53 73.6
Migut.N02937 Erythranthe guttata HOM05D005655 ORTHO05D007386 6.0e-19 96.7 54 74.1
Sp1g29390 Schrenkiella parvula HOM05D005655 ORTHO05D007386 6.0e-19 96.7 54 72.2
Dinv41018 Davidia involucrata HOM05D005655 ORTHO05D007386 7.9e-19 96.3 53 79.2
MD05G1036800 Malus domestica HOM05D005655 ORTHO05D007386 7.9e-19 96.3 54 77.8
SGA_v2.0_scaffold371G50147 Striga asiatica HOM05D005655 ORTHO05D007386 7.9e-19 96.3 54 75.9
THA.LOC104816107 Tarenaya hassleriana HOM05D005655 ORTHO05D007386 7.9e-19 96.3 54 72.2
unitig_21.g20592 Utricularia gibba HOM05D005655 ORTHO05D007386 7.9e-19 96.3 55 74.5
vmacro21200 Vaccinium macrocarpon HOM05D005655 ORTHO05D007386 7.9e-19 96.3 54 75.9
GSVIVG01013676001 Vitis vinifera HOM05D005655 ORTHO05D007386 7.9e-19 96.3 53 79.2
AL1G48650 Arabidopsis lyrata HOM05D005655 ORTHO05D007386 1.0e-18 95.9 54 70.4
AT1G34150 Arabidopsis thaliana HOM05D005655 ORTHO05D007386 1.0e-18 95.9 54 70.4
CSS0031675 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 1.0e-18 95.9 53 81.1
Rhsim06G0093900 Rhododendron simsii HOM05D005655 ORTHO05D007386 1.0e-18 95.9 54 75.9
BcaB07g33038 Brassica carinata HOM05D005655 ORTHO05D007386 1.3e-18 95.5 54 70.4
BcaC08g43808 Brassica carinata HOM05D005655 ORTHO05D007386 1.3e-18 95.5 54 70.4
A09p32350 Brassica napus HOM05D005655 ORTHO05D000003 1.3e-18 95.5 54 70.4
C06p11890 Brassica napus HOM05D005655 ORTHO05D000003 1.3e-18 95.5 54 70.4
BolC6t36321H Brassica oleracea HOM05D005655 ORTHO05D000003 1.3e-18 95.5 54 70.4
Carub.0001s3222 Capsella rubella HOM05D005655 ORTHO05D007386 1.3e-18 95.5 54 70.4
Thhalv10007608m.g Eutrema salsugineum HOM05D005655 ORTHO05D007386 1.3e-18 95.5 54 70.4
Sabra02G0049900 Salix brachista HOM05D005655 ORTHO05D007386 1.3e-18 95.5 53 73.6
Thecc.10G182000 Theobroma cacao HOM05D005655 ORTHO05D007386 1.3e-18 95.5 55 72.7
CSS0015534 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 1.8e-18 95.1 53 79.2
Duzib093G0465 Durio zibethinus HOM05D005655 ORTHO05D007386 1.8e-18 95.1 55 72.7
PGR042G2919 Punica granatum HOM05D005655 ORTHO05D007386 1.8e-18 95.1 54 74.1
CsaV3_6G004840 Cucumis sativus L. HOM05D005655 ORTHO05D007386 2.3e-18 94.7 53 79.2
MBI05_g00396_MAGBIO Magnolia biondii HOM05D001233 ORTHO05D001233 2.3e-18 94.7 54 74.1
TAR625G0054 Trochodendron aralioides HOM05D005655 ORTHO05D007386 2.3e-18 94.7 55 74.5
Aa31LG6G8320 Aethionema arabicum HOM05D005655 ORTHO05D000003 3.0e-18 94.4 54 74.1
Cc10_g06370 Coffea canephora HOM05D005655 ORTHO05D007386 3.0e-18 94.4 55 70.9
ECA247G4107 Erigeron canadensis HOM05D005655 ORTHO05D007386 3.0e-18 94.4 54 75.9
Manes.02G186000 Manihot esculenta HOM05D005655 ORTHO05D007386 3.0e-18 94.4 54 74.1
DCAR_013167 Daucus carota HOM05D005655 ORTHO05D007386 3.9e-18 94.0 55 74.5
Hund26667 Selenicereus undatus HOM05D005655 ORTHO05D007386 3.9e-18 94.0 54 72.2
Sc13g0008190 Simmondsia chinensis HOM05D005655 ORTHO05D007386 3.9e-18 94.0 54 70.4
RcHm_v2.0_Chr6g0273621 Rosa chinensis HOM05D005655 ORTHO05D007386 6.7e-18 93.2 54 75.9
Sed0016594 Sechium edule HOM05D005655 ORTHO05D007386 1.1e-17 92.4 53 77.4
Cfa018255 Carpinus fangiana HOM05D005655 ORTHO05D007386 1.5e-17 92.0 53 73.6
AUR62034929 Chenopodium quinoa HOM05D005655 ORTHO05D007386 1.5e-17 92.0 54 72.2
Potri.002G061650 Populus trichocarpa HOM05D005655 ORTHO05D007386 1.5e-17 92.0 53 69.8
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 1.9e-17 91.7 54 70.4
AUR62022311 Chenopodium quinoa HOM05D005655 ORTHO05D007386 1.9e-17 91.7 54 72.2
Nn5g28881 Nelumbo nucifera HOM05D005655 ORTHO05D007386 1.9e-17 91.7 54 68.5
Haze_17840 Corylus avellana HOM05D005655 ORTHO05D007386 2.5e-17 91.3 53 71.7
Hma1.2p1_0358F.1_g134900 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 3.3e-17 90.9 55 67.3
Hma1.2p1_0358F.1_g134910 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 3.3e-17 90.9 55 67.3
FvH4_2g12780 Fragaria vesca HOM05D005655 ORTHO05D007386 4.3e-17 90.5 54 74.1
TWI74G0660 Tripterygium wilfordii HOM05D005655 ORTHO05D007386 4.3e-17 90.5 54 68.5
MELO3C019957.2 Cucumis melo HOM05D005655 ORTHO05D007386 7.4e-17 89.7 53 75.5
Haze_17834 Corylus avellana HOM05D005655 ORTHO05D007386 9.6e-17 89.4 53 69.8
Nitab4.5_0000433g0050 Nicotiana tabacum HOM05D005655 ORTHO05D007386 1.3e-16 89.0 53 71.7
PSO170G2558 Papaver somniferum HOM05D005655 ORTHO05D007386 1.3e-16 89.0 53 69.8
PSO210G7095 Papaver somniferum HOM05D005655 ORTHO05D007386 1.3e-16 89.0 53 69.8
Peaxi162Scf00226g00219 Petunia axillaris HOM05D005655 ORTHO05D007386 1.3e-16 89.0 53 71.7
Aqoxy5G02015 Aquilegia oxysepala HOM05D005655 ORTHO05D007386 1.6e-16 88.6 54 70.4
CAN.G564.32 Capsicum annuum HOM05D005655 ORTHO05D007386 2.1e-16 88.2 53 71.7
Nitab4.5_0001000g0130 Nicotiana tabacum HOM05D005655 ORTHO05D007386 2.1e-16 88.2 53 71.7
Os03g0381100 Oryza sativa ssp. japonica HOM05D005655 ORTHO05D007386 3.7e-16 87.4 54 68.5
SHI09123 Sapria himalayana HOM05D005655 ORTHO05D007386 3.7e-16 87.4 53 66.0
PGSC0003DMG400031154 Solanum tuberosum HOM05D005655 ORTHO05D007386 4.8e-16 87.0 53 69.8
EL10Ac1g01637 Beta vulgaris HOM05D005655 ORTHO05D007386 8.2e-16 86.3 53 66.0
Solyc04g072140.4 Solanum lycopersicum HOM05D005655 ORTHO05D007386 8.2e-16 86.3 53 67.9
Sopen04g028310 Solanum pennellii HOM05D005655 ORTHO05D007386 8.2e-16 86.3 53 67.9
AagrBONN_evm.TU.Sc2ySwM_368.1575 Anthoceros agrestis HOM05D005655 ORTHO05D007386 1.1e-15 85.9 54 70.4
ATR0564G440 Amborella trichopoda HOM05D005655 ORTHO05D007386 5.3e-15 83.6 54 66.7
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 5.3e-15 83.6 54 64.8
SMO174G0185 Selaginella moellendorffii HOM05D005655 ORTHO05D007386 1.5e-14 82.0 53 66.0
Mapoly0139s0011 Marchantia polymorpha HOM05D005655 ORTHO05D007386 7.6e-14 79.7 54 64.8
HPP92_027831 Vanilla planifolia HOM05D005655 ORTHO05D007386 1.7e-13 78.6 54 61.1
Pp3c9_3740 Physcomitrium patens HOM05D005655 ORTHO05D007386 6.5e-13 76.6 54 63.0
Ca_10644_v3 Cicer arietinum L. HOM05D005655 ORTHO05D007386 1.4e-12 75.5 39 84.6
MCO10G057 Micromonas commoda HOM05D005655 ORTHO05D007386 1.6e-11 72.0 54 63.0
PRCOL_00002466 Prasinoderma coloniale HOM05D005655 ORTHO05D007386 3.9e-10 67.4 53 56.6
ClCG08G007170 Citrullus lanatus HOM05D005655 ORTHO05D007386 3.7e-08 60.8 47 63.8
Cpa.g.sc26.127 Carica papaya HOM05D005655 ORTHO05D007386 4.8e-08 60.5 35 74.3
FAN15G2448 Fragaria x ananassa HOM05D005655 ORTHO05D007386 8.2e-08 59.7 33 75.8
Ah.02g115760 Amaranthus hybridus HOM05D005655 ORTHO05D007386 9.0e-07 56.2 35 68.6
CBR_g31748 Chara braunii HOM05D005655 ORTHO05D007386 1.2e-06 55.8 35 68.6


User provided reference genes

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