Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7054 Trifolium pratense HOM05D004511 ORTHO05D005348 4.6e-28 127.1 60 100.0
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 1.0e-24 115.9 60 88.3
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 1.4e-24 115.5 60 86.7
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 2.3e-24 114.8 60 86.7
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 4.0e-24 114.0 60 85.0
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 4.0e-24 114.0 60 86.7
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 5.2e-24 113.6 60 85.0
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 6.8e-24 113.2 60 86.7
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 8.9e-24 112.8 60 85.0
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.2e-23 112.5 60 85.0
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 1.2e-23 112.5 60 85.0
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 1.5e-23 112.1 60 85.0
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 1.5e-23 112.1 60 81.7
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 1.5e-23 112.1 60 85.0
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 2.0e-23 111.7 60 85.0
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 2.0e-23 111.7 60 83.3
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 2.0e-23 111.7 60 83.3
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 2.0e-23 111.7 60 83.3
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 2.6e-23 111.3 60 83.3
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 3.4e-23 110.9 60 81.7
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 3.4e-23 110.9 60 85.0
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 3.4e-23 110.9 60 85.0
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 3.4e-23 110.9 60 81.7
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 5.8e-23 110.2 60 85.0
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 5.8e-23 110.2 60 80.0
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 7.5e-23 109.8 60 81.7
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 7.5e-23 109.8 60 83.3
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 7.5e-23 109.8 60 86.7
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 7.5e-23 109.8 60 81.7
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 7.5e-23 109.8 60 81.7
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 9.8e-23 109.4 60 83.3
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 9.8e-23 109.4 60 83.3
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 1.3e-22 109.0 60 81.7
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 1.3e-22 109.0 60 81.7
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 1.7e-22 108.6 60 83.3
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 1.7e-22 108.6 60 76.7
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 1.7e-22 108.6 60 80.0
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 2.2e-22 108.2 60 78.3
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 2.2e-22 108.2 60 81.7
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 2.2e-22 108.2 60 78.3
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 2.9e-22 107.8 60 80.0
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 3.7e-22 107.5 60 76.7
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 3.7e-22 107.5 60 83.3
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 4.9e-22 107.1 60 78.3
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 4.9e-22 107.1 60 85.0
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 6.4e-22 106.7 60 85.0
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 6.4e-22 106.7 60 85.0
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 8.3e-22 106.3 60 80.0
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 8.3e-22 106.3 60 78.3
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 8.3e-22 106.3 60 76.7
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 8.3e-22 106.3 60 78.3
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 8.3e-22 106.3 60 76.7
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 1.4e-21 105.5 60 81.7
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 1.4e-21 105.5 60 78.3
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 1.9e-21 105.1 60 80.0
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 1.9e-21 105.1 60 76.7
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 2.4e-21 104.8 60 81.7
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 2.4e-21 104.8 60 76.7
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 3.2e-21 104.4 60 76.7
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 3.2e-21 104.4 60 76.7
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 3.2e-21 104.4 60 76.7
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 3.2e-21 104.4 60 76.7
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 3.2e-21 104.4 60 76.7
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 3.2e-21 104.4 60 76.7
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 3.2e-21 104.4 60 76.7
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 3.2e-21 104.4 60 76.7
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 4.1e-21 104.0 60 83.3
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 4.1e-21 104.0 60 83.3
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 5.4e-21 103.6 60 76.7
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 5.4e-21 103.6 60 80.0
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 9.2e-21 102.8 60 75.0
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 9.2e-21 102.8 60 75.0
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 9.2e-21 102.8 60 76.7
Glyma.10G121578 Glycine max HOM05D004511 ORTHO05D005348 2.0e-20 101.7 60 76.7
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 3.5e-20 100.9 60 81.7
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 3.5e-20 100.9 60 80.0
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 3.5e-20 100.9 60 76.7
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 6.0e-20 100.1 60 76.7
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 6.0e-20 100.1 60 76.7
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.0e-19 99.4 60 81.7
Glyma.10G121584 Glycine max HOM05D004511 ORTHO05D005348 1.0e-19 99.4 59 76.3
Glyma.10G121600 Glycine max HOM05D004511 ORTHO05D005348 1.3e-19 99.0 60 75.0
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 1.7e-19 98.6 60 75.0
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 2.3e-19 98.2 60 75.0
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 2.3e-19 98.2 60 75.0
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 8.6e-19 96.3 60 73.3
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 8.6e-19 96.3 73 68.5
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 1.1e-18 95.9 70 65.7
Glyma.10G121560 Glycine max HOM05D004511 ORTHO05D005348 2.1e-17 91.7 77 59.7
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 1.2e-15 85.9 98 45.9
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 1.2e-15 85.9 78 55.1
CSS0045058 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.5e-15 85.5 42 90.5
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 2.6e-15 84.7 60 63.3
CSS0023992 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 4.4e-15 84.0 42 88.1
vmacro08561 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 4.4e-15 84.0 43 86.0
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 2.9e-14 81.3 56 62.5
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 4.9e-14 80.5 49 77.6
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 3.2e-13 77.8 60 53.3
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 5.4e-13 77.0 60 53.3
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 1.6e-12 75.5 43 76.7
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 7.8e-12 73.2 54 64.8
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 4.3e-10 67.4 33 87.9
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 5.6e-10 67.0 33 87.9
Lj6A637T62 Lonicera japonica HOM05D004511 ORTHO05D005348 5.6e-10 67.0 33 87.9
Ca_30594_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 6.2e-09 63.5 33 87.9
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 4.4e-07 57.4 65 50.8


User provided reference genes

Program Settings