Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 4.9e-91 337.8 174 100.0
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 1.5e-84 316.2 173 92.5
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 4.5e-84 314.7 173 92.5
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 1.6e-81 306.2 173 89.0
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 8.7e-80 300.4 173 87.3
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 4.3e-79 298.1 173 86.7
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 5.6e-79 297.7 173 86.7
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 7.4e-79 297.4 173 86.7
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 4.0e-77 291.6 173 85.5
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 6.9e-77 290.8 169 86.4
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 6.9e-77 290.8 173 85.0
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 1.2e-76 290.0 173 85.0
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 2.6e-76 288.9 173 83.2
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 1.3e-72 276.6 173 79.8
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 5.1e-72 274.6 173 79.2
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 1.5e-71 273.1 173 78.6
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 1.9e-71 272.7 173 79.2
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 4.3e-71 271.6 173 79.8
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 5.7e-71 271.2 173 78.6
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 9.7e-71 270.4 173 79.8
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 9.7e-71 270.4 173 78.6
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 1.3e-70 270.0 173 78.6
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 1.6e-70 269.6 173 78.0
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 2.8e-70 268.9 172 79.1
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 6.3e-70 267.7 162 82.1
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 1.1e-69 266.9 166 80.1
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 1.1e-69 266.9 173 77.5
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 1.8e-69 266.2 173 78.0
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 1.8e-69 266.2 173 78.0
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 1.8e-69 266.2 174 78.7
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 2.4e-69 265.8 174 77.0
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 6.9e-69 264.2 168 79.2
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 9.0e-69 263.8 177 77.4
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 9.0e-69 263.8 173 76.9
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 4.5e-68 261.5 173 75.7
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 7.6e-68 260.8 169 76.3
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 7.6e-68 260.8 173 77.5
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 7.6e-68 260.8 173 75.1
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 7.6e-68 260.8 173 75.7
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 1.0e-67 260.4 173 75.7
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 1.3e-67 260.0 173 76.3
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 1.3e-67 260.0 173 75.1
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 1.3e-67 260.0 173 72.8
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 1.7e-67 259.6 174 76.4
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 2.9e-67 258.8 173 72.8
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 6.5e-67 257.7 173 75.7
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 8.5e-67 257.3 169 75.1
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 8.5e-67 257.3 169 75.7
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 1.1e-66 256.9 173 76.3
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 1.1e-66 256.9 173 74.6
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.4e-66 256.5 166 78.3
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 1.9e-66 256.1 169 75.1
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 4.2e-66 255.0 169 74.6
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 7.2e-66 254.2 166 76.5
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 7.2e-66 254.2 173 74.6
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 9.3e-66 253.8 165 77.0
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.2e-65 253.4 173 75.1
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.2e-65 253.4 173 75.1
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 2.7e-65 252.3 174 75.3
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 4.6e-65 251.5 173 72.8
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 1.3e-64 250.0 173 72.8
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 5.1e-64 248.1 168 76.8
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 5.1e-64 248.1 173 71.1
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 1.1e-63 246.9 175 72.0
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 1.5e-63 246.5 173 72.8
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 1.9e-63 246.1 173 72.3
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 2.5e-63 245.7 173 71.1
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 3.3e-63 245.4 174 71.8
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 5.7e-63 244.6 173 71.7
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 7.4e-63 244.2 173 72.3
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 9.7e-63 243.8 173 71.1
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 1.3e-62 243.4 171 71.9
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 1.7e-62 243.0 173 71.1
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 2.8e-62 242.3 173 70.5
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 3.7e-62 241.9 173 71.7
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 4.8e-62 241.5 166 73.5
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 4.8e-62 241.5 166 73.5
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 1.1e-61 240.4 199 67.8
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 1.8e-61 239.6 173 69.9
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 4.1e-61 238.4 173 71.1
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 4.1e-61 238.4 173 70.5
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 5.3e-61 238.0 166 72.3
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 9.1e-61 237.3 168 72.6
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 9.1e-61 237.3 172 71.5
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 1.2e-60 236.9 173 69.4
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 1.5e-60 236.5 168 70.8
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 1.5e-60 236.5 168 70.8
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 2.0e-60 236.1 173 70.5
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 6.5e-59 231.1 175 68.6
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 1.1e-58 230.3 173 69.4
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.1e-58 230.3 204 61.8
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 1.2e-57 226.9 180 67.2
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 4.7e-57 224.9 140 82.1
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 6.1e-57 224.6 169 66.9
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 6.1e-57 224.6 150 76.0
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 3.0e-56 222.2 173 65.9
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 3.9e-56 221.9 203 57.6
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.7e-54 216.5 146 74.0
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 1.7e-54 216.5 181 63.0
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.7e-54 215.3 140 80.0
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 1.8e-53 213.0 173 64.7
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 5.9e-52 208.0 132 80.3
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 2.9e-51 205.7 174 62.1
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 8.5e-51 204.1 122 85.2
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 2.1e-49 199.5 122 83.6
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 6.1e-49 198.0 162 60.5
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 1.4e-48 196.8 176 55.7
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 3.3e-47 192.2 174 58.6
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 1.4e-45 186.8 114 79.8
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 1.6e-41 173.3 165 58.2
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 4.7e-41 171.8 112 75.9
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.3e-39 165.6 122 73.0
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 7.5e-39 164.5 173 53.2
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 1.3e-35 153.7 173 49.7
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 2.2e-35 152.9 141 62.4
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 9.4e-34 147.5 171 46.2
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 1.6e-33 146.7 156 46.8
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 2.0e-31 139.8 212 42.0
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 2.8e-30 136.0 169 49.1
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 9.1e-29 131.0 84 78.6
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 1.7e-27 126.7 86 72.1
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 3.8e-27 125.6 86 69.8
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 8.6e-27 124.4 99 62.6
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 2.1e-25 119.8 72 81.9
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 4.0e-24 115.5 72 81.9
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.5e-23 113.6 81 72.8
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.9e-18 96.7 77 63.6
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 4.3e-18 95.5 109 46.8
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-10 69.7 86 37.2


User provided reference genes

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