Gene: PGSC0003DMG400016186
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400016186
- Transcript Identifier PGSC0003DMT400041744
- Gene Type Coding gene
- Location ST4.03ch11 : 2039208-2042729 : negative
Gene Family Information
- ID HOM05D005334
- #Genes/#Species 142/96
- Phylogenetic origin
- ID ORTHO05D006560
- #Genes/#Species 141/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37464888
- id PGSC0003DMG400016186.v4.03
- uniprot M1BBW4
Descriptions
- Description Elongator component
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000024 | IEA | GOA Database | regulation of leaf development | |
| GO:0035265 | ISO | PLAZA Integrative Orthology | organ growth | AT3G11220 |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT3G11220 |
| GO:0031538 | IEA | GOA Database | negative regulation of anthocyanin metabolic process | |
| GO:0008284 | IEA | GOA Database | positive regulation of cell population proliferation | |
| GO:0006979 | IEA | GOA Database | response to oxidative stress | |
| GO:0010928 | IEA | GOA Database | regulation of auxin mediated signaling pathway | |
| GO:0009737 | IEA | GOA Database | response to abscisic acid | |
| GO:0043609 | IEA | GOA Database | regulation of carbon utilization | |
| GO:0071329 | IEA | GOA Database | cellular response to sucrose stimulus | |
| GO:0002098 | IBA IEA | GOA Database | tRNA wobble uridine modification | |
| GO:0002098 | IEA | InterPro | tRNA wobble uridine modification | |
| GO:0008033 | IEA | GOA Database | tRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G11220 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033588 | IBA IEA | GOA Database | elongator holoenzyme complex | |
| GO:0033588 | IEA | InterPro | elongator holoenzyme complex | |
| GO:0008023 | IBA | GOA Database | transcription elongation factor complex | |
| GO:0005737 | IBA IEA | GOA Database | cytoplasm | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.3.5.2.4 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.component ELP4 |