Gene: Pp3c9_23940
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c9_23940
- Transcript Identifier Pp3c9_23940V3.2
- Gene Type Coding gene
- Location Chr09 : 16358335-16360930 : negative
Gene Family Information
- ID HOM05D005334
- #Genes/#Species 142/96
- Phylogenetic origin
- ID ORTHO05D006560
- #Genes/#Species 141/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c9_23940V3.2
- pacid 32913524
- alias Phpat.009G088800
- uniprot A0A2K1K4C8
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT3G11220 |
| GO:0071329 | ISO | PLAZA Integrative Orthology | cellular response to sucrose stimulus | AT3G11220 |
| GO:2000024 | ISO | PLAZA Integrative Orthology | regulation of leaf development | AT3G11220 |
| GO:0043609 | ISO | PLAZA Integrative Orthology | regulation of carbon utilization | AT3G11220 |
| GO:0008284 | ISO | PLAZA Integrative Orthology | positive regulation of cell population proliferation | AT3G11220 |
| GO:0010928 | ISO | PLAZA Integrative Orthology | regulation of auxin mediated signaling pathway | AT3G11220 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G11220 |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT3G11220 |
| GO:0035265 | ISO | PLAZA Integrative Orthology | organ growth | AT3G11220 |
| GO:0031538 | ISO | PLAZA Integrative Orthology | negative regulation of anthocyanin metabolic process | AT3G11220 |
| GO:0002098 | IBA IEA | GOA Database | tRNA wobble uridine modification | |
| GO:0002098 | IEA | InterPro | tRNA wobble uridine modification | |
| GO:0008033 | IEA | GOA Database | tRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G11220 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IBA IEA | GOA Database | cytoplasm | |
| GO:0008023 | IBA | GOA Database | transcription elongation factor complex | |
| GO:0033588 | IBA IEA | GOA Database | elongator holoenzyme complex | |
| GO:0033588 | IEA | InterPro | elongator holoenzyme complex | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.3.5.2.4 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.component ELP4 |