Gene: Solyc11g010950.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g010950.2
  • Transcript Identifier Solyc11g010950.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 4030607-4034195 : positive

Gene Family Information

  • ID HOM05D005334
  • #Genes/#Species 142/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g010950.2.1
  • uniprot A0A3Q7IR73
  • gene_id Solyc11g010950

Descriptions

  • Description Elongator complex protein 4 (AHRD V3.3 *** A0A1U8EZY2_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT3G11220
GO:0071329
ISO
PLAZA Integrative Orthologycellular response to sucrose stimulus AT3G11220
GO:2000024
ISO
PLAZA Integrative Orthologyregulation of leaf development AT3G11220
GO:0043609
ISO
PLAZA Integrative Orthologyregulation of carbon utilization AT3G11220
GO:0008284
ISO
PLAZA Integrative Orthologypositive regulation of cell population proliferation AT3G11220
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT3G11220
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G11220
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G11220
GO:0035265
ISO
PLAZA Integrative Orthologyorgan growth AT3G11220
GO:0031538
ISO
PLAZA Integrative Orthologynegative regulation of anthocyanin metabolic process AT3G11220
GO:0002098
IBA
IEA
GOA DatabasetRNA wobble uridine modification
GO:0002098
IEA
InterProtRNA wobble uridine modification
GO:0008033
IEA
GOA DatabasetRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G11220

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033588
IBA
IEA
GOA Databaseelongator holoenzyme complex
GO:0033588
IEA
InterProelongator holoenzyme complex
GO:0008023
IBA
GOA Databasetranscription elongation factor complex
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR008728 Elongator complex protein 4
Mapman id Description
15.3.5.2.4 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.component ELP4