Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G481 Trifolium pratense HOM05D000575 ORTHO05D412629 3.5e-91 338.2 162 100.0
Phvul.002G313300 Phaseolus vulgaris HOM05D000575 ORTHO05D015429 8.8e-18 94.4 121 46.3
Ca_00501_v3 Cicer arietinum L. HOM05D000575 ORTHO05D004448 3.7e-16 89.0 95 52.6
TPR.G20631 Trifolium pratense HOM05D000575 ORTHO05D004448 9.1e-15 84.3 95 51.6
Medtr2g018290 Medicago truncatula HOM05D000575 ORTHO05D004448 1.6e-14 83.6 95 49.5
Aa31LG10G10660 Aethionema arabicum HOM05D000575 ORTHO05D004448 3.5e-14 82.4 95 49.5
Carub.0007s0806 Capsella rubella HOM05D000575 ORTHO05D004448 1.0e-13 80.9 95 48.4
SGA_v2.0_scaffold5G02628 Striga asiatica HOM05D000575 ORTHO05D004448 1.0e-13 80.9 95 50.5
AT4G32520 Arabidopsis thaliana HOM05D000575 ORTHO05D004448 1.3e-13 80.5 95 48.4
CARHR240440 Cardamine hirsuta HOM05D000575 ORTHO05D004448 1.3e-13 80.5 95 48.4
GSVIVG01035348001 Vitis vinifera HOM05D000575 ORTHO05D004448 1.3e-13 80.5 95 49.5
AL7G19290 Arabidopsis lyrata HOM05D000575 ORTHO05D004448 1.7e-13 80.1 95 47.4
Cpa.g.sc30.43 Carica papaya HOM05D000575 ORTHO05D004448 1.7e-13 80.1 95 47.4
Migut.A00148 Erythranthe guttata HOM05D000575 ORTHO05D004448 2.2e-13 79.7 95 49.5
CANSAT35G0503 Cannabis sativa HOM05D000575 ORTHO05D004448 2.9e-13 79.3 95 48.4
Prupe.8G013000 Prunus persica HOM05D000575 ORTHO05D004448 2.9e-13 79.3 95 48.4
Actinidia30303 Actinidia chinensis HOM05D000575 ORTHO05D004448 3.8e-13 79.0 95 47.4
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 5.0e-13 78.6 95 47.4
CDE04G3194 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 5.0e-13 78.6 95 47.4
Hma1.2p1_2451F.1_g322370 Hydrangea macrophylla HOM05D000575 ORTHO05D004448 6.5e-13 78.2 95 47.4
MD17G1267800 Malus domestica HOM05D000575 ORTHO05D004448 6.5e-13 78.2 95 47.4
Peaxi162Scf00064g01624 Petunia axillaris HOM05D000575 ORTHO05D004448 6.5e-13 78.2 95 48.4
SalBow2G1573 Salvia bowleyana HOM05D000575 ORTHO05D004448 6.5e-13 78.2 95 49.5
COL.COLO4_21032 Corchorus olitorius HOM05D000575 ORTHO05D004448 8.5e-13 77.8 95 47.4
ECA246G5031 Erigeron canadensis HOM05D000575 ORTHO05D002277 8.5e-13 77.8 95 47.4
Manes.16G078300 Manihot esculenta HOM05D000575 ORTHO05D004448 1.1e-12 77.4 95 47.4
Sed0019045 Sechium edule HOM05D000575 ORTHO05D004448 1.1e-12 77.4 95 47.4
SEGI_27254 Sequoiadendron giganteum HOM05D000575 ORTHO05D004448 1.1e-12 77.4 95 45.3
SEGI_30444 Sequoiadendron giganteum HOM05D000575 ORTHO05D004448 1.1e-12 77.4 95 45.3
Ciclev10019689m.g Citrus clementina HOM05D000575 ORTHO05D004448 1.5e-12 77.0 95 46.3
Cc00_g19170 Coffea canephora HOM05D000575 ORTHO05D004448 1.5e-12 77.0 95 47.4
Sed0025809 Sechium edule HOM05D000575 ORTHO05D004448 1.5e-12 77.0 95 46.3
Hma1.2p1_0450F.1_g155670 Hydrangea macrophylla HOM05D000575 ORTHO05D004448 1.9e-12 76.6 95 47.4
Lj8C553T0 Lonicera japonica HOM05D000575 ORTHO05D004448 3.2e-12 75.9 95 46.3
Lj8C555T0 Lonicera japonica HOM05D000575 ORTHO05D004448 3.2e-12 75.9 95 46.3
Haze_10136 Corylus avellana HOM05D000575 ORTHO05D004448 4.2e-12 75.5 95 46.3
Oeu036346.2 Olea europaea HOM05D000575 ORTHO05D004448 4.2e-12 75.5 107 43.0
MBI04_g06215_MAGBIO Magnolia biondii HOM05D000575 ORTHO05D004448 7.2e-12 74.7 95 45.3
PSO384G1897 Papaver somniferum HOM05D000575 ORTHO05D004448 1.0e-10 70.9 93 46.2
Pp3c12_14950 Physcomitrium patens HOM05D000575 ORTHO05D310897 4.4e-09 65.5 155 27.7
Medtr1g073580 Medicago truncatula HOM05D000575 ORTHO05D258397 9.8e-09 64.3 43 79.1
arahy.Tifrunner.gnm1.ann1.H6AWHY Arachis hypogaea HOM05D000575 ORTHO05D004448 1.1e-07 60.8 39 76.9
arahy.Tifrunner.gnm1.ann1.MW6Y9I Arachis hypogaea HOM05D000575 ORTHO05D004448 1.1e-07 60.8 39 76.9
arahy.Tifrunner.gnm1.ann1.ZLWU4E Arachis hypogaea HOM05D000575 ORTHO05D004448 1.4e-07 60.5 39 76.9
Psat1g192400 Pisum sativum HOM05D000575 ORTHO05D004448 1.4e-07 60.5 39 74.4
BcaB03g12748 Brassica carinata HOM05D000575 ORTHO05D004448 2.4e-07 59.7 39 74.4
Glyma.15G089900 Glycine max HOM05D000575 ORTHO05D004448 2.4e-07 59.7 39 74.4
THA.LOC104823505 Tarenaya hassleriana HOM05D000575 ORTHO05D004448 2.4e-07 59.7 39 74.4
PSO170G1433 Papaver somniferum HOM05D000575 ORTHO05D004448 3.1e-07 59.3 39 71.8
PSO210G7801 Papaver somniferum HOM05D000575 ORTHO05D004448 3.1e-07 59.3 39 71.8
PSO339G0311 Papaver somniferum HOM05D000575 ORTHO05D004448 3.1e-07 59.3 39 71.8
PSO541G1411 Papaver somniferum HOM05D000575 ORTHO05D004448 3.1e-07 59.3 39 71.8
PSO541G1552 Papaver somniferum HOM05D000575 ORTHO05D013853 3.1e-07 59.3 39 71.8
PSO675G5852 Papaver somniferum HOM05D000575 ORTHO05D004448 3.1e-07 59.3 39 71.8
PSO675G5906 Papaver somniferum HOM05D000575 ORTHO05D004448 3.1e-07 59.3 39 71.8
PSO801G0541 Papaver somniferum HOM05D000575 ORTHO05D004448 3.1e-07 59.3 39 71.8
PGR142G3713 Punica granatum HOM05D000575 ORTHO05D004448 3.1e-07 59.3 39 74.4
BcaC01g01020 Brassica carinata HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
BcaC09g52041 Brassica carinata HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
A01p05880 Brassica napus HOM05D000746 ORTHO05D000573 5.4e-07 58.5 39 71.8
A08p18160 Brassica napus HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
C01p06500 Brassica napus HOM05D000746 ORTHO05D000573 5.4e-07 58.5 39 71.8
C03p87320 Brassica napus HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
BolC1t00644H Brassica oleracea HOM05D000746 ORTHO05D000573 5.4e-07 58.5 39 71.8
BolC3t21032H Brassica oleracea HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
BraA01t00555Z Brassica rapa HOM05D000746 ORTHO05D000573 5.4e-07 58.5 39 71.8
BraA08t33769Z Brassica rapa HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
Haze_10134 Corylus avellana HOM05D000575 ORTHO05D004448 5.4e-07 58.5 109 34.9
Thhalv10024908m.g Eutrema salsugineum HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
Thhalv10024909m.g Eutrema salsugineum HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
Glyma.13G222300 Glycine max HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
Lj6g0024057 Lotus japonicus HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
Lalb_Chr15g0086571 Lupinus albus HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 74.4
Lalb_Chr18g0055091 Lupinus albus HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 74.4
PSO170G4203 Papaver somniferum HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 69.2
Phvul.006G168300 Phaseolus vulgaris HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
Sp7g30290 Schrenkiella parvula HOM05D000575 ORTHO05D004448 5.4e-07 58.5 39 71.8
arahy.Tifrunner.gnm1.ann1.6YG2VI Arachis hypogaea HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 74.4
CiPaw.02G054800 Carya illinoinensis HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
ClCG07G001670 Citrullus lanatus HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
ClCG07G010870 Citrullus lanatus HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
MELO3C016200.2 Cucumis melo HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
CsaV3_4G007440 Cucumis sativus L. HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
DCAR_000791 Daucus carota HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
Dinv23425 Davidia involucrata HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
Dinv27968 Davidia involucrata HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
Duzib187G1840 Durio zibethinus HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
Gohir.A06G087701 Gossypium hirsutum HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
Gohir.D06G088800 Gossypium hirsutum HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
Gorai.010G102600 Gossypium raimondii HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
PSO170G3278 Papaver somniferum HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 69.2
PSO339G6273 Papaver somniferum HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 69.2
QL02p001520 Quercus lobata HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
Rhsim07G0143500 Rhododendron simsii HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 69.2
Hund19471 Selenicereus undatus HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 69.2
TWI38G1986 Tripterygium wilfordii HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
vmacro00159 Vaccinium macrocarpon HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
vmacro03343 Vaccinium macrocarpon HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
VMungo0540G0267 Vigna mungo HOM05D000575 ORTHO05D004448 7.0e-07 58.2 39 71.8
CSS0015428 Camellia sinensis var. sinensis HOM05D000575 ORTHO05D004448 9.2e-07 57.8 39 69.2
CSS0041003 Camellia sinensis var. sinensis HOM05D000575 ORTHO05D004448 9.2e-07 57.8 39 69.2
Lsat_1_v5_gn_5_152721 Lactuca sativa HOM05D000575 ORTHO05D004448 9.2e-07 57.8 141 33.3
PSO478G2007 Papaver somniferum HOM05D000575 ORTHO05D004448 9.2e-07 57.8 39 69.2
Potri.006G232300 Populus trichocarpa HOM05D000575 ORTHO05D004448 9.2e-07 57.8 39 69.2
Rhsim11G0046100 Rhododendron simsii HOM05D000575 ORTHO05D004448 9.2e-07 57.8 39 69.2
Sabra06G0180700 Salix brachista HOM05D000575 ORTHO05D004448 9.2e-07 57.8 39 69.2
TAR383G0523 Trochodendron aralioides HOM05D000575 ORTHO05D004448 9.2e-07 57.8 39 69.2
MSTRG.25941 Avicennia marina HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 71.8
Cre06.g293950 Chlamydomonas reinhardtii HOM05D000575 ORTHO05D004524 1.2e-06 57.4 78 41.0
Lj7C9T4 Lonicera japonica HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 69.2
Lalb_Chr20g0117671 Lupinus albus HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 71.8
Nitab4.5_0001179g0030 Nicotiana tabacum HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 71.8
Peaxi162Scf00436g00824 Petunia axillaris HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 71.8
Solyc08g065490.3 Solanum lycopersicum HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 71.8
Sopen08g019100 Solanum pennellii HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 71.8
PGSC0003DMG400002200 Solanum tuberosum HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 71.8
Thecc.09G051600 Theobroma cacao HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 71.8
TWI63G1518 Tripterygium wilfordii HOM05D000575 ORTHO05D004448 1.2e-06 57.4 39 71.8
Medtr7g108420 Medicago truncatula HOM05D000575 ORTHO05D004448 1.6e-06 57.0 75 49.3
PSO675G7639 Papaver somniferum HOM05D000575 ORTHO05D004448 1.6e-06 57.0 39 69.2
Atru.chr7.2016 Acer truncatum HOM05D000575 ORTHO05D004448 2.0e-06 56.6 39 69.2
Haze_18209 Corylus avellana HOM05D000575 ORTHO05D004448 2.0e-06 56.6 39 69.2
MD09G1269900 Malus domestica HOM05D000575 ORTHO05D004448 2.0e-06 56.6 39 69.2
PSO339G6479 Papaver somniferum HOM05D000575 ORTHO05D004448 2.0e-06 56.6 39 69.2
CAN.G208.74 Capsicum annuum HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
Cfa017937 Carpinus fangiana HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
DCAR_004443 Daucus carota HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 71.8
Gohir.D05G045200 Gossypium hirsutum HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
Gorai.009G046400 Gossypium raimondii HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
MD10G1009100 Malus domestica HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
Nitab4.5_0000738g0140 Nicotiana tabacum HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
Nitab4.5_0011306g0040 Nicotiana tabacum HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
PSO675G2206 Papaver somniferum HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 64.1
Prupe.3G165800 Prunus persica HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
SMO118G0403 Selaginella moellendorffii HOM05D000575 ORTHO05D004524 2.7e-06 56.2 100 34.0
Solyc12g095930.2 Solanum lycopersicum HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
Sopen12g031830 Solanum pennellii HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
PGSC0003DMG400029389 Solanum tuberosum HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
unitig_899.g15399 Utricularia gibba HOM05D000575 ORTHO05D004448 2.7e-06 56.2 39 69.2
CAN.G6.18 Capsicum annuum HOM05D000575 ORTHO05D004448 3.5e-06 55.8 39 69.2
PSO017G1097 Papaver somniferum HOM05D000575 ORTHO05D004448 3.5e-06 55.8 39 69.2
PSO017G3386 Papaver somniferum HOM05D000575 ORTHO05D004448 3.5e-06 55.8 39 69.2
PSO339G4920 Papaver somniferum HOM05D000575 ORTHO05D004448 3.5e-06 55.8 39 69.2
PSO675G3323 Papaver somniferum HOM05D000575 ORTHO05D004448 3.5e-06 55.8 39 69.2
CSS0018687 Camellia sinensis var. sinensis HOM05D000575 ORTHO05D003840 4.5e-06 55.5 78 39.7
Actinidia01200 Actinidia chinensis HOM05D000575 ORTHO05D004448 5.9e-06 55.1 39 66.7
HanXRQChr15g0475391 Helianthus annuus HOM05D000575 ORTHO05D004448 5.9e-06 55.1 39 66.7
PSO782G0202 Papaver somniferum HOM05D000575 ORTHO05D004448 5.9e-06 55.1 39 64.1
FvH4_7g07540 Fragaria vesca HOM05D000575 ORTHO05D004448 7.7e-06 54.7 39 66.7
FAN01G2004 Fragaria x ananassa HOM05D000575 ORTHO05D004448 7.7e-06 54.7 39 66.7
FAN03G0013 Fragaria x ananassa HOM05D000575 ORTHO05D004448 7.7e-06 54.7 39 66.7
FAN06G3927 Fragaria x ananassa HOM05D000575 ORTHO05D004448 7.7e-06 54.7 39 66.7
FAN10G1790 Fragaria x ananassa HOM05D000575 ORTHO05D004448 7.7e-06 54.7 39 66.7
HanXRQChr17g0548331 Helianthus annuus HOM05D000575 ORTHO05D004448 7.7e-06 54.7 39 66.7
Pp3c13_1080 Physcomitrium patens HOM05D000575 ORTHO05D004448 7.7e-06 54.7 39 64.1
Pp3c13_1100 Physcomitrium patens HOM05D000575 ORTHO05D004448 7.7e-06 54.7 39 64.1
TWI12G0303 Tripterygium wilfordii HOM05D000575 ORTHO05D003840 7.7e-06 54.7 96 35.4


User provided reference genes

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