Gene: Sopen08g019100

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g019100
  • Transcript Identifier Sopen08g019100.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 57474004-57477676 : negative

Gene Family Information

  • ID HOM05D000575
  • #Genes/#Species 966/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g019100.1

Descriptions

  • Description Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid. | serine hydroxymethyltransferase 3 (SHM3) | FUNCTIONS IN: glycine hydroxymethyltransferase activity | INVOLVED IN: glycine metabolic process, L-serine metabolic process | LOCATED IN: chloroplast, plastid | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain , Serine hydroxymethyltransferase, pyridoxal phosphate binding site , Pyridoxal phosphate-dependent transferase, major region, subdomain 1 , Serine hydroxymethyltransferase | BEST Arabidopsis thaliana protein match is: serine transhydroxymethyltransferase 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019264
IEA
InterProglycine biosynthetic process from serine
GO:0035999
IEA
InterProtetrahydrofolate interconversion

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0004372
IEA
InterProglycine hydroxymethyltransferase activity
GO:0030170
IEA
InterPropyridoxal phosphate binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G32520
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G32520
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT4G32520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039429 Serine hydroxymethyltransferase-like domain
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR015424 Pyridoxal phosphate-dependent transferase
IPR001085 Serine hydroxymethyltransferase
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
Mapman id Description
1.3.5 Photosynthesis.photorespiration.serine hydroxymethyltransferase (SHM)