Gene: FAN01G2004

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN01G2004
  • Transcript Identifier FAN01G2004.1
  • Gene Type Coding gene
  • Location Fvb7-4 : 16390135-16393491 : positive

Gene Family Information

  • ID HOM05D000575
  • #Genes/#Species 966/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb7-4-augustus-gene-164.27.v1.0.a1
  • pacid 50540047

Descriptions

  • Description K00600 - glycine hydroxymethyltransferase (glyA, SHMT)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019264
IEA
InterProglycine biosynthetic process from serine
GO:0035999
IEA
InterProtetrahydrofolate interconversion

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0004372
IEA
InterProglycine hydroxymethyltransferase activity
GO:0030170
IEA
InterPropyridoxal phosphate binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G32520
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G32520
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT4G32520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015424 Pyridoxal phosphate-dependent transferase
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR001085 Serine hydroxymethyltransferase
IPR039429 Serine hydroxymethyltransferase-like domain
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
Mapman id Description
1.3.5 Photosynthesis.photorespiration.serine hydroxymethyltransferase (SHM)