Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4503 Trifolium pratense HOM05D000216 ORTHO05D001131 1.6e-51 205.7 96 100.0
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 1.6e-22 109.4 69 78.3
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.7e-22 108.6 69 79.7
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 2.7e-22 108.6 69 79.7
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.0e-21 106.7 57 86.0
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 1.0e-21 106.7 57 86.0
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 1.0e-21 106.7 57 86.0
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 1.3e-21 106.3 57 84.2
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 1.3e-21 106.3 57 84.2
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 1.7e-21 105.9 57 82.5
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 3.0e-21 105.1 57 82.5
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 3.0e-21 105.1 57 82.5
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 3.0e-21 105.1 57 82.5
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 3.0e-21 105.1 57 82.5
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 3.0e-21 105.1 57 84.2
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 3.0e-21 105.1 57 82.5
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 3.0e-21 105.1 57 82.5
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 3.0e-21 105.1 57 82.5
Sc13g0006970 Simmondsia chinensis HOM05D000216 ORTHO05D001131 3.9e-21 104.8 56 87.5
Lj2A1238G119 Lonicera japonica HOM05D000216 ORTHO05D001131 5.1e-21 104.4 56 85.7
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 5.1e-21 104.4 57 82.5
Nn020s41502 Nelumbo nucifera HOM05D000216 ORTHO05D001131 5.1e-21 104.4 56 83.9
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 6.6e-21 104.0 57 82.5
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 1.1e-20 103.2 57 82.5
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 1.1e-20 103.2 57 82.5
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 1.1e-20 103.2 57 82.5
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 1.1e-20 103.2 57 82.5
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.5e-20 102.8 57 80.7
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 1.5e-20 102.8 57 80.7
Thecc.07G188500 Theobroma cacao HOM05D000216 ORTHO05D001131 1.5e-20 102.8 57 80.7
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 1.9e-20 102.4 57 78.9
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 1.9e-20 102.4 57 80.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 3.3e-20 101.7 57 80.7
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 4.3e-20 101.3 57 80.7
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 4.3e-20 101.3 57 80.7
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 4.3e-20 101.3 57 80.7
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 4.3e-20 101.3 57 80.7
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 80.7
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 80.7
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.6e-20 100.9 57 77.2
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 9.5e-20 100.1 57 78.9
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 9.5e-20 100.1 57 78.9
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 9.5e-20 100.1 57 78.9
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.2e-19 99.8 57 78.9
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.2e-19 99.8 57 75.4
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 3.6e-19 98.2 57 77.2
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 6.2e-19 97.4 57 78.9
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 1.1e-18 96.7 57 75.4
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 1.4e-18 96.3 57 73.7
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.8e-18 95.9 57 78.9
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 1.8e-18 95.9 57 77.2
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 1.8e-18 95.9 72 68.1
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.3e-18 95.5 69 72.5
Oeu012828.1 Olea europaea HOM05D000216 ORTHO05D001131 5.2e-18 94.4 56 75.0
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 6.8e-18 94.0 69 71.0
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 6.8e-18 94.0 69 71.0
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 8.9e-18 93.6 69 71.0
TPR.G32479 Trifolium pratense HOM05D000216 ORTHO05D001131 8.9e-18 93.6 55 78.2
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 1.5e-17 92.8 56 76.8
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 9.9e-17 90.1 69 69.6
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.9e-16 88.6 57 73.7
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 7.8e-14 80.5 57 66.7
Nitab4.5_0000095g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.8e-10 69.3 43 74.4
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.5e-09 66.2 57 57.9
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 4.9e-08 61.2 57 57.9
EL10Ac1g01787 Beta vulgaris HOM05D000216 ORTHO05D001131 1.1e-07 60.1 42 69.0
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.4e-07 59.7 30 83.3
EL10Ac1g01786 Beta vulgaris HOM05D000216 ORTHO05D001131 3.2e-07 58.5 34 76.5
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 3.2e-07 58.5 30 80.0
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 7.1e-07 57.4 50 60.0
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 7.1e-07 57.4 57 52.6
Gohir.D12G077902 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.7e-06 55.5 48 62.5
ClCG10G008040 Citrullus lanatus HOM05D000216 ORTHO05D013308 3.5e-06 55.1 28 78.6
arahy.Tifrunner.gnm1.ann1.V1C6S4 Arachis hypogaea HOM05D000216 ORTHO05D001131 4.6e-06 54.7 50 56.0


User provided reference genes

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