Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32479 Trifolium pratense HOM05D000216 ORTHO05D001131 1.5e-169 599.4 292 100.0
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 2.9e-43 179.9 103 83.5
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 2.9e-43 179.9 103 83.5
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 2.9e-43 179.9 103 83.5
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 2.4e-42 176.8 102 82.4
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 2.4e-42 176.8 102 82.4
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 4.2e-42 176.0 102 82.4
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 5.4e-42 175.6 103 80.6
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 7.1e-42 175.3 102 82.4
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 7.1e-42 175.3 102 82.4
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 7.1e-42 175.3 102 82.4
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 7.1e-42 175.3 102 82.4
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 9.3e-42 174.9 102 82.4
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 9.3e-42 174.9 102 82.4
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 9.3e-42 174.9 102 82.4
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 9.3e-42 174.9 102 82.4
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 9.3e-42 174.9 102 81.4
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 1.2e-41 174.5 102 81.4
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 1.6e-41 174.1 102 81.4
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 3.5e-41 172.9 102 80.4
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 3.5e-41 172.9 102 80.4
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 3.5e-41 172.9 102 80.4
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 3.5e-41 172.9 102 81.4
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 3.5e-41 172.9 102 81.4
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 6.0e-41 172.2 102 80.4
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 6.0e-41 172.2 102 80.4
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.7e-40 170.6 102 79.4
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 2.3e-40 170.2 102 78.4
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 2.3e-40 170.2 102 79.4
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 5.1e-40 169.1 102 80.4
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 5.1e-40 169.1 102 80.4
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 8.7e-40 168.3 102 77.5
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 1.1e-39 167.9 102 78.4
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 1.1e-39 167.9 102 78.4
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 1.1e-39 167.9 102 78.4
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.1e-39 167.9 103 79.6
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 1.1e-39 167.9 102 78.4
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 1.5e-39 167.5 102 78.4
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.5e-39 167.5 102 78.4
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 1.5e-39 167.5 102 77.5
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 1.5e-39 167.5 102 76.5
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 78.4
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-39 167.2 102 76.5
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 4.3e-39 166.0 101 80.2
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.3e-39 166.0 102 75.5
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 4.3e-39 166.0 102 77.5
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.8e-38 163.3 103 77.7
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 1.1e-37 161.4 102 75.5
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.8e-35 152.9 102 74.5
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 4.9e-35 152.5 102 72.5
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 1.4e-34 151.0 102 71.6
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 1.4e-34 151.0 102 71.6
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 3.2e-34 149.8 99 73.7
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 7.9e-33 145.2 103 71.8
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.8e-30 136.7 102 68.6
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.4e-29 133.7 77 83.1
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 1.2e-28 131.3 77 81.8
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.6e-28 130.2 77 81.8
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.3e-27 127.9 77 80.5
Thecc.07G188500 Theobroma cacao HOM05D000216 ORTHO05D001131 2.9e-27 126.7 78 78.2
Eucgr.C02946 Eucalyptus grandis HOM05D000216 ORTHO05D001131 1.9e-26 124.0 68 86.8
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 2.7e-25 120.2 89 66.3
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 2.7e-25 120.2 76 73.7
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 4.6e-25 119.4 102 60.8
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 2.3e-24 117.1 72 79.2
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.5e-23 113.6 65 81.5
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 1.3e-22 111.3 66 81.8
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 3.4e-20 103.2 68 73.5
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 3.4e-20 103.2 78 66.7
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.6e-20 102.1 61 80.3
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.0e-19 101.7 60 81.7
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.0e-19 101.7 60 81.7
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.0e-19 101.7 60 81.7
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.0e-19 101.7 60 81.7
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.5e-18 97.1 57 82.5
TPR.G4503 Trifolium pratense HOM05D000216 ORTHO05D001131 4.6e-17 92.8 55 78.2
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 7.9e-17 92.0 102 47.1
Lj2A1238G119 Lonicera japonica HOM05D000216 ORTHO05D001131 1.0e-16 91.7 53 79.2
Nn020s41502 Nelumbo nucifera HOM05D000216 ORTHO05D001131 1.0e-16 91.7 53 77.4
Sc13g0006970 Simmondsia chinensis HOM05D000216 ORTHO05D001131 3.0e-16 90.1 53 79.2
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 3.9e-16 89.7 102 47.1
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 1.9e-15 87.4 68 63.2
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 3.3e-15 86.7 54 74.1
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 9.7e-15 85.1 60 71.7
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-14 84.7 50 80.0
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 3.7e-14 83.2 51 82.4
Oeu012828.1 Olea europaea HOM05D000216 ORTHO05D001131 1.1e-13 81.6 53 67.9
SMO086G0059 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.8e-13 80.9 88 45.5
SMO113G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.8e-13 80.9 88 45.5
SMO161G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.8e-13 80.9 88 45.5
SMO168G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.8e-13 80.9 88 45.5
SMO237G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.8e-13 80.9 88 45.5
SMO299G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.8e-13 80.9 88 45.5
Solyc04g026310.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.4e-10 71.2 59 57.6
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 7.2e-10 68.9 35 82.9
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 9.3e-10 68.6 76 47.4
Nitab4.5_0000095g0040 Nicotiana tabacum HOM05D000216 ORTHO05D001131 2.7e-09 67.0 46 67.4
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 2.7e-09 67.0 50 62.0
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 3.6e-09 66.6 37 78.4
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 3.6e-09 66.6 36 77.8
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 6.1e-09 65.9 35 80.0
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.3e-08 64.7 36 77.8
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 1.8e-08 64.3 95 40.0
EL10Ac1g01787 Beta vulgaris HOM05D000216 ORTHO05D001131 2.8e-06 57.0 44 63.6
Potri.007G076300 Populus trichocarpa HOM05D002707 ORTHO05D002925 2.8e-06 57.0 110 34.5
VMungo0720G1527 Vigna mungo HOM05D002707 ORTHO05D002925 2.8e-06 57.0 103 34.0
MSTRG.2074 Avicennia marina HOM05D002707 ORTHO05D002925 3.7e-06 56.6 106 35.8
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 3.7e-06 56.6 30 76.7
Potri.005G087600 Populus trichocarpa HOM05D002707 ORTHO05D002925 4.8e-06 56.2 111 33.3


User provided reference genes

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