Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26480 Trifolium pratense HOM05D000216 ORTHO05D000634 4.4e-62 241.1 122 100.0
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 1.8e-39 166.0 90 88.9
Psat2g044360 Pisum sativum HOM05D000216 ORTHO05D000634 3.4e-38 161.8 90 87.8
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 4.1e-36 154.8 90 81.1
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.3e-34 149.1 90 77.8
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 5.1e-34 147.9 87 80.5
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 5.1e-34 147.9 87 80.5
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 5.1e-34 147.9 87 80.5
Lj1g0027665 Lotus japonicus HOM05D000216 ORTHO05D000634 8.6e-34 147.1 89 80.9
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 8.6e-34 147.1 89 80.9
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 1.5e-33 146.4 89 78.7
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 1.9e-33 146.0 87 79.3
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 2.5e-33 145.6 87 79.3
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 5.6e-33 144.4 87 78.2
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.6e-33 144.4 87 78.2
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.6e-33 144.4 87 78.2
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 5.6e-33 144.4 87 78.2
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 9.6e-33 143.7 86 79.1
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.2e-32 143.3 91 73.6
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.2e-32 143.3 91 73.6
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.2e-32 143.3 91 73.6
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.2e-32 143.3 91 73.6
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.6e-32 142.9 87 78.2
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.8e-32 142.1 87 77.0
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 3.6e-32 141.7 87 78.2
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 6.2e-32 141.0 87 75.9
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 6.2e-32 141.0 87 75.9
CAN.G939.13 Capsicum annuum HOM05D000216 ORTHO05D000634 6.2e-32 141.0 87 75.9
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.2e-32 141.0 87 75.9
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 6.2e-32 141.0 87 75.9
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.1e-31 140.2 88 76.1
Atru.chr6.1615 Acer truncatum HOM05D000216 ORTHO05D000634 1.4e-31 139.8 86 76.7
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 1.4e-31 139.8 87 73.6
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.4e-31 139.8 87 77.0
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 2.4e-31 139.0 80 80.0
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 3.1e-31 138.7 80 80.0
CAN.G511.9 Capsicum annuum HOM05D000216 ORTHO05D000634 5.2e-31 137.9 87 74.7
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 5.2e-31 137.9 87 74.7
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 5.2e-31 137.9 80 76.2
HanXRQChr00c0988g0578131 Helianthus annuus HOM05D000216 ORTHO05D000634 6.8e-31 137.5 87 73.6
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 5.8e-30 134.4 84 76.2
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 5.8e-30 134.4 80 78.8
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 5.8e-30 134.4 80 78.8
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 5.8e-30 134.4 80 78.8
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 5.8e-30 134.4 80 78.8
Lalb_Chr06g0173101 Lupinus albus HOM05D000216 ORTHO05D000634 7.6e-30 134.0 90 72.2
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 2.9e-29 132.1 87 73.6
Glyma.02G221400 Glycine max HOM05D000216 ORTHO05D000634 4.9e-29 131.3 89 71.9
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 4.9e-29 131.3 83 77.1
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 6.4e-29 131.0 81 72.8
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 6.4e-29 131.0 87 70.1
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.4e-29 131.0 84 72.6
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 1.1e-28 130.2 70 90.0
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 1.1e-28 130.2 83 75.9
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 1.1e-28 130.2 83 75.9
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 1.1e-28 130.2 83 75.9
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 1.1e-28 130.2 83 75.9
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 1.1e-28 130.2 83 75.9
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 1.4e-28 129.8 70 91.4
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 2.4e-28 129.0 88 68.2
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 2.1e-27 125.9 69 84.1
Medtr5g098620 Medicago truncatula HOM05D000216 ORTHO05D000634 2.7e-27 125.6 69 82.6
Gohir.D03G089666 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.3e-26 122.5 81 69.1
Lalb_Chr13g0292901 Lupinus albus HOM05D000216 ORTHO05D000634 2.3e-26 122.5 70 78.6
Hund04025 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.3e-26 122.5 84 69.0
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 3.0e-26 122.1 72 76.4
HanXRQChr07g0188321 Helianthus annuus HOM05D000216 ORTHO05D000634 5.1e-26 121.3 78 70.5
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 6.6e-26 120.9 87 63.2
Gorai.003G071700 Gossypium raimondii HOM05D000216 ORTHO05D000634 8.7e-26 120.6 80 70.0
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.1e-25 120.2 79 70.9
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.9e-25 119.4 80 71.2
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.9e-25 119.4 104 55.8
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 3.3e-25 118.6 87 62.1
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 3.3e-25 118.6 87 62.1
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 7.3e-25 117.5 86 65.1
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 9.6e-25 117.1 66 80.3
Gohir.D01G206650 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.6e-24 116.3 77 70.1
Solyc08g028910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-24 116.3 81 67.9
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.8e-24 115.5 93 60.2
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 3.6e-24 115.2 66 78.8
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 3.6e-24 115.2 66 77.3
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 6.2e-24 114.4 66 80.3
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 6.2e-24 114.4 80 68.8
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.1e-24 114.0 84 65.5
Lsat_1_v5_gn_3_118000 Lactuca sativa HOM05D000216 ORTHO05D000634 1.1e-23 113.6 67 76.1
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 2.4e-23 112.5 66 78.8
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 2.4e-23 112.5 64 81.2
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 9.0e-23 110.5 100 57.0
HanXRQChr00c0823g0577631 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-22 110.2 62 79.0
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-22 109.8 66 72.7
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 2.0e-22 109.4 64 76.6
Migut.K00966 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.4e-22 108.2 87 60.9
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 9.9e-22 107.1 90 63.3
EL10Ac3g05558 Beta vulgaris HOM05D000216 ORTHO05D000634 1.3e-21 106.7 62 75.8
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 1.7e-21 106.3 90 63.3
HanXRQChr14g0454991 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-19 99.0 56 75.0
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.5e-19 98.6 64 68.8
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.9e-19 97.4 66 66.7
Lalb_Chr23g0274571 Lupinus albus HOM05D000216 ORTHO05D000634 7.9e-19 97.4 58 75.9
arahy.Tifrunner.gnm1.ann1.EI2YTD Arachis hypogaea HOM05D000890 ORTHO05D000697 1.0e-18 97.1 55 78.2
Gorai.002G075300 Gossypium raimondii HOM05D000216 ORTHO05D000634 2.5e-17 92.4 58 70.7
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 5.6e-17 91.3 54 75.9
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-14 83.2 65 60.0
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 2.0e-14 82.8 57 73.7
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.6e-14 82.4 46 76.1
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 8.4e-13 77.4 44 81.8
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.1e-12 77.0 43 74.4
arahy.Tifrunner.gnm1.ann1.8W122S Arachis hypogaea HOM05D000216 ORTHO05D000634 1.9e-12 76.3 64 59.4
Medtr3g035000 Medicago truncatula HOM05D000079 ORTHO05D004075 2.1e-11 72.8 39 84.6
CARHR056720 Cardamine hirsuta HOM05D000216 ORTHO05D000634 1.3e-10 70.1 41 80.5
Migut.D01340 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.8e-10 69.7 79 50.6
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 1.1e-09 67.0 86 41.9
Solyc05g020010.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 1.1e-09 67.0 39 74.4
Lalb_Chr06g0173001 Lupinus albus HOM05D000216 ORTHO05D000634 4.0e-07 58.5 39 69.2
Nitab4.5_0004184g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.3e-07 58.2 41 68.3


User provided reference genes

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