Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 0.0e+00 1085.5 543 100.0
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 1.4e-253 879.4 544 80.9
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 2.0e-231 805.8 534 74.2
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 3.9e-219 765.0 541 69.9
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 2.5e-218 762.3 539 69.2
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 1.3e-217 760.0 539 70.3
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 2.8e-217 758.8 536 70.5
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 3.6e-217 758.4 406 87.4
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.8e-216 756.1 534 71.0
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 2.4e-216 755.7 536 69.6
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 5.3e-216 754.6 543 69.2
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 9.0e-216 753.8 534 69.3
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 2.0e-215 752.7 540 68.9
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 2.6e-215 752.3 544 68.4
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 3.4e-215 751.9 536 69.8
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 7.6e-215 750.7 536 69.0
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 1.3e-214 750.0 535 68.2
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 1.3e-214 750.0 540 70.0
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.7e-214 749.6 534 69.1
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 2.9e-214 748.8 536 68.3
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 2.9e-214 748.8 535 69.0
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 3.8e-214 748.4 545 68.6
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 4.9e-214 748.0 536 69.2
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 4.9e-214 748.0 540 68.7
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 1.4e-213 746.5 538 67.5
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 4.2e-213 745.0 491 72.9
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 4.2e-213 745.0 513 70.4
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 5.4e-213 744.6 534 68.9
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 7.1e-213 744.2 535 68.2
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 2.1e-212 742.7 536 68.5
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 2.7e-212 742.3 537 68.9
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 4.6e-212 741.5 539 68.8
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 4.6e-212 741.5 535 69.2
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 1.0e-211 740.3 549 68.5
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 1.3e-211 740.0 529 69.6
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 1.8e-211 739.6 537 68.0
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 2.3e-211 739.2 545 67.9
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 2.3e-211 739.2 537 68.7
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 3.9e-211 738.4 531 68.7
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 5.1e-211 738.0 531 69.3
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 6.7e-211 737.6 528 68.8
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 8.7e-211 737.3 536 68.1
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 1.1e-210 736.9 541 68.4
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 1.1e-210 736.9 536 68.1
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 1.1e-210 736.9 538 68.6
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 1.5e-210 736.5 536 67.4
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 3.3e-210 735.3 544 67.8
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 3.3e-210 735.3 541 68.9
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 4.3e-210 734.9 520 69.6
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 5.6e-210 734.6 537 67.8
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 5.6e-210 734.6 541 68.4
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 7.4e-210 734.2 535 67.3
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 7.4e-210 734.2 535 67.7
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.6e-209 733.0 529 68.8
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.6e-209 733.0 536 67.9
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.6e-209 733.0 540 66.9
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 2.1e-209 732.6 532 68.2
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 4.8e-209 731.5 544 68.0
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 6.2e-209 731.1 544 68.2
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 6.2e-209 731.1 544 68.2
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 8.1e-209 730.7 526 67.9
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 8.1e-209 730.7 541 68.6
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.4e-208 729.9 559 66.7
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 1.4e-208 729.9 559 66.9
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 1.8e-208 729.6 562 64.8
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 1.8e-208 729.6 535 67.7
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 1.8e-208 729.6 541 68.4
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 4.0e-208 728.4 538 67.3
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 5.3e-208 728.0 532 66.4
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 5.3e-208 728.0 545 66.8
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 6.9e-208 727.6 520 68.3
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 9.0e-208 727.2 532 66.2
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 2.0e-207 726.1 531 66.7
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 2.0e-207 726.1 531 66.7
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.6e-207 725.7 559 65.1
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 5.8e-207 724.5 543 66.7
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 7.6e-207 724.2 541 68.9
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 1.0e-206 723.8 541 66.7
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 1.3e-206 723.4 531 66.7
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 2.2e-206 722.6 541 66.4
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 4.9e-206 721.5 543 68.1
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 8.4e-206 720.7 550 65.8
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.4e-205 719.9 540 66.3
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.9e-205 719.5 571 63.9
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 2.5e-205 719.2 538 66.2
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 3.2e-205 718.8 542 66.4
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 3.2e-205 718.8 555 65.0
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 1.6e-204 716.5 526 68.1
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 2.7e-204 715.7 537 66.9
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 3.5e-204 715.3 540 65.9
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 3.5e-204 715.3 535 66.4
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 4.6e-204 714.9 593 61.7
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 2.3e-203 712.6 537 67.8
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 3.9e-203 711.8 567 64.4
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 5.1e-203 711.4 539 66.0
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 1.9e-202 709.5 538 65.2
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 1.9e-202 709.5 460 73.0
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 3.7e-201 705.3 575 62.8
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 4.0e-200 701.8 465 70.8
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 1.0e-198 697.2 545 64.8
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 2.2e-198 696.0 535 65.0
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 2.9e-198 695.7 524 66.6
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 6.5e-198 694.5 540 64.8
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 8.4e-198 694.1 527 66.2
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.1e-194 683.7 463 70.6
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 2.2e-185 652.9 531 63.7
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 3.1e-184 649.0 462 66.9
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 9.1e-184 647.5 428 70.6
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 1.7e-182 643.3 399 75.9
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 1.3e-177 627.1 460 66.1
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 2.3e-163 579.7 435 65.5
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 8.5e-158 561.2 329 78.4
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.2e-156 557.4 403 66.7
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 8.0e-148 528.1 452 56.0
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 4.9e-145 518.8 412 64.1
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 9.2e-144 514.6 460 55.9
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 2.9e-137 493.0 281 80.4
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 1.8e-131 473.8 448 53.3
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 1.1e-125 454.5 455 52.7
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.4e-123 447.6 415 56.6
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.8e-123 447.2 400 60.0
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 8.9e-123 444.9 344 63.4
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 4.3e-117 426.0 389 56.6
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 1.6e-111 407.5 330 64.2
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 9.3e-80 302.0 179 75.4
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 7.4e-77 292.4 179 76.0
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 6.5e-73 279.3 171 74.9
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 7.4e-69 265.8 274 55.8
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.2e-58 231.9 235 56.2
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 1.1e-51 208.8 134 67.9
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.1e-43 182.2 114 74.6
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 1.6e-34 151.8 100 69.0
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 4.9e-28 130.2 81 75.3
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 4.3e-24 117.1 68 77.9
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 3.5e-18 97.4 53 77.4
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 4.6e-18 97.1 50 80.0
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 2.6e-13 81.3 55 67.3
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 2.6e-13 81.3 57 64.9
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 2.6e-13 81.3 57 64.9
CBR_g21303 Chara braunii HOM05D001677 ORTHO05D000002 2.3e-06 58.2 183 30.1


User provided reference genes

Program Settings