Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 1.2e-69 266.5 153 100.0
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 2.0e-51 206.1 155 81.3
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 3.6e-45 185.3 122 83.6
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 2.0e-43 179.5 125 78.4
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.2e-40 170.2 153 69.9
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.2e-40 170.2 153 69.9
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 7.7e-40 167.5 153 60.8
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 2.5e-38 162.5 152 68.4
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 6.1e-37 157.9 154 68.2
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 6.6e-31 137.9 156 62.2
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 1.2e-29 133.7 157 59.2
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 1.6e-29 133.3 155 59.4
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 2.1e-29 132.9 155 58.7
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 2.1e-29 132.9 125 66.4
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 2.0e-27 126.3 155 56.8
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 2.0e-27 126.3 154 53.2
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 2.6e-27 125.9 156 57.1
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 4.4e-27 125.2 150 58.0
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 5.8e-27 124.8 153 56.9
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 7.5e-27 124.4 154 53.9
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 7.5e-27 124.4 154 53.9
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 1.3e-26 123.6 157 56.1
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.2e-26 122.9 154 53.9
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 2.2e-26 122.9 150 55.3
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 2.9e-26 122.5 154 53.9
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 4.9e-26 121.7 150 54.7
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 2.4e-25 119.4 155 47.1
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 3.2e-25 119.0 153 47.1
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 7.0e-25 117.9 155 52.9
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 7.0e-25 117.9 153 55.6
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 9.2e-25 117.5 152 56.6
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 1.2e-24 117.1 151 55.0
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 1.2e-24 117.1 153 53.6
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.6e-24 116.7 153 55.6
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.7e-24 115.9 144 54.9
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 2.7e-24 115.9 156 55.8
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 3.5e-24 115.5 151 54.3
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 7.8e-24 114.4 154 53.9
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 6.6e-23 111.3 146 47.9
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 8.6e-23 110.9 144 58.3
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.1e-22 110.5 158 50.6
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 1.5e-22 110.2 154 50.6
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 1.5e-22 110.2 153 52.3
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 1.9e-22 109.8 150 44.7
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 2.5e-22 109.4 154 51.3
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 2.5e-22 109.4 146 51.4
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 2.5e-22 109.4 153 52.3
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 2.5e-22 109.4 149 51.0
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 3.3e-22 109.0 155 50.3
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 3.3e-22 109.0 148 53.4
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 4.3e-22 108.6 154 57.1
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 4.3e-22 108.6 150 56.0
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 5.6e-22 108.2 150 53.3
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 7.3e-22 107.8 154 50.6
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 7.3e-22 107.8 149 51.7
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 9.5e-22 107.5 150 54.0
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 1.2e-21 107.1 151 53.6
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.6e-21 106.7 147 51.7
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 2.1e-21 106.3 152 52.6
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.8e-21 105.9 149 55.0
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 6.2e-21 104.8 150 54.0
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.1e-20 104.0 151 53.0
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 1.4e-20 103.6 156 50.6
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 1.8e-20 103.2 151 54.3
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.8e-20 103.2 146 55.5
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 2.3e-20 102.8 144 57.6
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 4.0e-20 102.1 143 52.4
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 4.0e-20 102.1 147 55.1
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 5.2e-20 101.7 154 51.9
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 6.8e-20 101.3 156 50.6
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 6.8e-20 101.3 145 44.1
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 6.8e-20 101.3 145 44.8
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 8.9e-20 100.9 150 48.7
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.2e-19 100.5 147 53.1
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.5e-19 100.1 142 55.6
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 2.0e-19 99.8 153 54.2
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 4.4e-19 98.6 145 52.4
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.3e-18 97.1 150 53.3
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 2.9e-18 95.9 145 51.7
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 3.7e-18 95.5 119 52.9
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.9e-18 95.1 122 52.5
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 4.9e-18 95.1 144 45.1
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 1.1e-17 94.0 154 49.4
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 1.1e-17 94.0 122 49.2
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.4e-17 93.6 119 50.4
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.4e-17 93.6 122 49.2
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 4.1e-17 92.0 122 48.4
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.2e-16 90.5 155 51.6
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.6e-16 90.1 151 50.3
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.1e-16 89.7 147 51.7
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 1.3e-15 87.0 137 51.8
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 8.6e-15 84.3 111 50.5
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 1.1e-14 84.0 117 44.4
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 7.3e-14 81.3 96 54.2
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.8e-13 79.3 96 53.1
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.2e-11 73.9 142 49.3
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 4.4e-11 72.0 144 47.2
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 5.8e-11 71.6 64 67.2
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.3e-10 70.5 71 60.6
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 1.7e-10 70.1 144 47.2
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 2.9e-10 69.3 157 42.7
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 6.4e-10 68.2 60 66.7
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 5.4e-09 65.1 146 33.6
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 5.4e-09 65.1 146 33.6
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 4.6e-08 62.0 169 42.6


User provided reference genes

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