Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 1.0e-131 473.4 241 100.0
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 4.8e-129 464.5 241 97.9
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 1.5e-125 453.0 241 94.6
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 8.0e-124 447.2 241 94.2
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 3.5e-119 431.8 241 90.0
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 1.6e-116 422.9 241 85.5
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 6.1e-116 421.0 222 95.5
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 1.4e-115 419.9 240 86.7
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 5.2e-115 417.9 241 85.1
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 1.2e-114 416.8 241 85.1
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 1.5e-114 416.4 241 85.5
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 2.6e-114 415.6 241 85.5
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 3.4e-114 415.2 241 84.6
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 4.4e-114 414.8 240 85.4
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 5.7e-114 414.5 241 86.7
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 1.0e-110 403.7 240 83.3
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 7.3e-109 397.5 241 80.5
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 6.1e-108 394.4 240 81.7
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 1.0e-107 393.7 240 81.2
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 2.3e-107 392.5 231 85.3
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 3.0e-107 392.1 241 80.5
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 2.6e-106 389.0 241 79.3
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 2.6e-106 389.0 237 81.4
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 3.4e-106 388.7 240 79.6
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 1.7e-105 386.3 241 78.8
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 2.9e-105 385.6 241 78.4
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 3.7e-105 385.2 241 79.3
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 4.9e-105 384.8 241 80.5
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 4.9e-105 384.8 241 78.8
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 4.9e-105 384.8 240 81.2
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 8.3e-105 384.0 241 78.8
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 1.1e-104 383.6 240 77.5
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 1.8e-104 382.9 241 78.8
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 1.8e-104 382.9 240 77.9
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 2.4e-104 382.5 240 77.9
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 7.0e-104 380.9 239 78.2
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 7.0e-104 380.9 239 78.2
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 1.2e-103 380.2 237 77.6
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 2.0e-103 379.4 241 78.0
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 2.0e-103 379.4 212 87.7
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 2.7e-103 379.0 240 77.1
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 4.6e-103 378.3 237 77.2
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 4.6e-103 378.3 241 76.3
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 5.9e-103 377.9 236 78.0
CANSAT64G1060 Cannabis sativa HOM05D004647 ORTHO05D005349 7.8e-103 377.5 237 78.5
ATR0680G372 Amborella trichopoda HOM05D004647 ORTHO05D005349 5.0e-102 374.8 241 75.9
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 6.6e-102 374.4 229 79.9
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 8.6e-102 374.0 241 74.7
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 1.1e-101 373.6 239 76.6
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 1.9e-101 372.9 241 75.9
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 4.3e-101 371.7 241 77.2
CARHR059710 Cardamine hirsuta HOM05D004647 ORTHO05D005349 9.5e-101 370.5 239 74.5
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 1.2e-100 370.2 241 75.5
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 1.2e-100 370.2 260 71.5
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.1e-100 369.4 229 79.0
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.8e-100 369.0 228 79.4
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 8.0e-100 367.5 229 78.6
AL7G19680 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.0e-99 367.1 239 74.9
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 1.0e-99 367.1 249 74.7
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.8e-99 366.3 232 77.6
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 2.3e-99 365.9 274 69.3
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 3.1e-99 365.5 241 75.9
MD06G1174300 Malus domestica HOM05D004647 ORTHO05D005349 4.0e-99 365.2 240 75.4
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 6.8e-99 364.4 235 76.2
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 1.2e-98 363.6 340 58.5
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 1.5e-98 363.2 242 76.4
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 2.0e-98 362.8 241 74.7
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 2.0e-98 362.8 234 77.8
BcaC01g01036 Brassica carinata HOM05D004647 ORTHO05D005349 5.8e-98 361.3 239 74.9
A08p18330 Brassica napus HOM05D004647 ORTHO05D005349 5.8e-98 361.3 239 74.9
BraA08t33790Z Brassica rapa HOM05D004647 ORTHO05D005349 5.8e-98 361.3 239 74.9
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 9.8e-98 360.5 241 74.7
PGSC0003DMG400027091 Solanum tuberosum HOM05D004647 ORTHO05D005349 9.8e-98 360.5 235 75.3
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 1.7e-97 359.8 239 74.5
CSS0008435 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 2.9e-97 359.0 241 75.1
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 2.9e-97 359.0 238 75.2
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 4.9e-97 358.2 237 75.5
Os01g0891400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 1.4e-96 356.7 230 76.1
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 1.9e-96 356.3 236 74.2
BolC3t21057H Brassica oleracea HOM05D004647 ORTHO05D005349 1.9e-96 356.3 239 74.1
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 4.1e-96 355.1 241 73.9
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 7.0e-96 354.4 239 72.4
Os01g0661400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 7.0e-96 354.4 230 75.2
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 1.6e-95 353.2 213 81.7
CAN.G628.78 Capsicum annuum HOM05D004647 ORTHO05D005349 2.0e-95 352.8 229 74.7
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 2.7e-95 352.4 228 76.3
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.0e-94 350.5 239 71.1
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 1.0e-94 350.5 208 82.7
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 2.3e-94 349.4 241 73.4
BcaB03g12733 Brassica carinata HOM05D004647 ORTHO05D005349 5.0e-94 348.2 239 71.5
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 2.5e-93 345.9 266 67.3
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 2.5e-93 345.9 236 73.7
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 2.1e-92 342.8 211 79.1
Thhalv10026115m.g Eutrema salsugineum HOM05D004647 ORTHO05D005349 2.8e-92 342.4 239 70.3
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 4.7e-92 341.7 284 63.0
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 4.0e-91 338.6 283 63.3
CARHR240100 Cardamine hirsuta HOM05D004647 ORTHO05D005349 5.2e-91 338.2 239 66.9
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 2.6e-90 335.9 202 81.2
Zm00001eb157720 Zea mays HOM05D004647 ORTHO05D005349 4.4e-90 335.1 230 71.3
DCAR_028017 Daucus carota HOM05D004647 ORTHO05D005349 3.7e-89 332.0 199 81.9
MD06G1174500 Malus domestica HOM05D004647 ORTHO05D005349 5.4e-88 328.2 242 69.8
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 2.1e-87 326.2 213 74.2
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 6.2e-84 314.7 241 68.5
Peaxi162Scf00689g00228 Petunia axillaris HOM05D004647 ORTHO05D005349 5.2e-83 311.6 199 76.9
Zm00001eb157740 Zea mays HOM05D004647 ORTHO05D005349 2.6e-82 309.3 205 73.2
Carub.0007s0838 Capsella rubella HOM05D004647 ORTHO05D005349 5.4e-80 301.6 190 76.8
Aa31LG2G17760 Aethionema arabicum HOM05D004647 ORTHO05D005349 2.7e-79 299.3 239 64.4
CsaV3_1G001530 Cucumis sativus L. HOM05D004647 ORTHO05D005349 8.1e-76 287.7 171 81.9
Dinv02900 Davidia involucrata HOM05D004647 ORTHO05D005349 2.2e-73 279.6 176 77.3
Mapoly0033s0011 Marchantia polymorpha HOM05D004647 ORTHO05D005349 2.2e-73 279.6 230 59.1
Pp3c9_4960 Physcomitrium patens HOM05D004647 ORTHO05D005349 2.2e-73 279.6 230 61.3
SMO358G0755 Selaginella moellendorffii HOM05D004647 ORTHO05D005349 4.6e-71 271.9 228 57.5
THA.LOC104801749 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 1.3e-70 270.4 167 77.2
THA.LOC104815465 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 1.2e-63 247.3 149 80.5
Nn3g16872 Nelumbo nucifera HOM05D004647 ORTHO05D005349 6.6e-62 241.5 145 78.6
SEGI_17588 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 1.3e-57 227.3 141 79.4
SEGI_39775 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 1.3e-57 227.3 141 79.4
AagrBONN_evm.TU.Sc2ySwM_117.3294 Anthoceros agrestis HOM05D004647 ORTHO05D005349 6.4e-57 224.9 195 56.4
VMungo1215G1703 Vigna mungo HOM05D004647 ORTHO05D005349 6.4e-57 224.9 123 90.2
MELO3C026290.2 Cucumis melo HOM05D004647 ORTHO05D005349 1.9e-56 223.4 135 81.5
Medtr5g009430 Medicago truncatula HOM05D004647 ORTHO05D005349 4.6e-55 218.8 120 92.5
Sed0007118 Sechium edule HOM05D004647 ORTHO05D005349 6.0e-55 218.4 181 64.6
VMungo1215G3307 Vigna mungo HOM05D004647 ORTHO05D005349 3.1e-51 206.1 121 82.6
QL02p101061 Quercus lobata HOM05D004647 ORTHO05D005349 7.6e-50 201.4 120 84.2
PSO384G3338 Papaver somniferum HOM05D004647 ORTHO05D005349 1.7e-49 200.3 170 61.8
Cre07.g319900 Chlamydomonas reinhardtii HOM05D004647 ORTHO05D005349 4.9e-49 198.7 231 44.2
CSS0025503 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.4e-48 197.2 127 77.2
QL02p101105 Quercus lobata HOM05D004647 ORTHO05D005349 1.9e-48 196.8 120 81.7
Zm00001eb359590 Zea mays HOM05D004647 ORTHO05D005349 4.2e-48 195.7 131 70.2
Ca_07701_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 8.7e-46 188.0 129 79.1
CBR_g61059 Chara braunii HOM05D004647 ORTHO05D005349 4.1e-43 179.1 234 44.0
Glyma.19G045000 Glycine max HOM05D004647 ORTHO05D005349 1.8e-38 163.7 121 67.8
SEGI_00924 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 2.2e-33 146.7 101 74.3
CAN.G110.1 Capsicum annuum HOM05D004647 ORTHO05D005349 3.2e-32 142.9 132 56.8
PRCOL_00002933 Prasinoderma coloniale HOM05D004647 ORTHO05D005349 3.0e-30 136.3 178 45.5
CSS0039197 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.1e-29 134.4 111 64.0
Ca_22423_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 5.7e-29 132.1 100 74.0
Oeu005668.1 Olea europaea HOM05D004647 ORTHO05D005349 5.7e-29 132.1 85 71.8
Ca_24957_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 2.8e-28 129.8 106 65.1
Cc00_g25260 Coffea canephora HOM05D004647 ORTHO05D005349 2.8e-28 129.8 81 80.2
Cc00_g18100 Coffea canephora HOM05D004647 ORTHO05D005349 3.4e-26 122.9 89 68.5
SEGI_26695 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 5.9e-26 122.1 152 41.4
Cfa024128 Carpinus fangiana HOM05D004647 ORTHO05D005349 1.7e-25 120.6 219 35.6
Potri.015G075400 Populus trichocarpa HOM05D004647 ORTHO05D005349 1.2e-23 114.4 72 79.2
PGSC0003DMG400042364 Solanum tuberosum HOM05D004647 ORTHO05D005349 6.1e-23 112.1 91 59.3
MCO01G631 Micromonas commoda HOM05D004647 ORTHO05D005349 7.4e-21 105.1 183 32.8
Cc00_g33640 Coffea canephora HOM05D004647 ORTHO05D005349 2.2e-17 93.6 51 86.3
CSS0048825 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 2.9e-17 93.2 53 84.9
SEGI_09107 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 2.1e-15 87.0 53 73.6
MD14G1181100 Malus domestica HOM05D004647 ORTHO05D005349 8.8e-14 81.6 163 37.4
QL02p027014 Quercus lobata HOM05D004647 ORTHO05D005349 1.1e-08 64.7 32 87.5
SHI17043 Sapria himalayana HOM05D004647 ORTHO05D005349 3.6e-07 59.7 30 90.0
QL02p024044 Quercus lobata HOM05D004647 ORTHO05D005349 4.7e-07 59.3 33 72.7
Medtr5g009450 Medicago truncatula HOM05D004647 ORTHO05D005349 6.8e-06 55.5 49 67.3


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