Gene: Lsat_1_v5_gn_4_75321

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_75321
  • Transcript Identifier Lsat_1_v5_gn_4_75321.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 119257421-119259339 : positive

Gene Family Information

  • ID HOM05D004647
  • #Genes/#Species 157/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_75321.v5
  • pacid 38930294

Descriptions

  • Description K03681 - exosome complex component RRP40 (RRP40, EXOSC3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000178
IEA
InterProexosome (RNase complex)

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026699 Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 K Homology domain, type 1 superfamily
IPR012340 Nucleic acid-binding, OB-fold
IPR004088 K Homology domain, type 1
IPR037319 Rrp40, S1 domain
Mapman id Description
16.4.1.1.1 RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP40